RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 IL16Q14005 1332 aa16.9■□□□□ 0.3
HMGCR-208ENST00000509431 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.3
HMGCR-208ENST00000509431 USP14P54578 494 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 GSTO1P78417 241 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 CSPP1Q1MSJ5 1256 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 MTCH2Q9Y6C9 303 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 REV3LO60673 3130 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
HMGCR-208ENST00000509431 MOXD2PA6NHM9 499 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 APBB1O00213 710 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 PGK1P00558 417 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 ACRP10323 421 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 JAG1P78504 1218 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 MECOMQ03112 1051 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
HMGCR-208ENST00000509431 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
HMGCR-208ENST00000509431 ABRAQ8N0Z2 381 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 SHCBP1Q8NEM2 672 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 FBXL18Q96ME1 805 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 UIMC1Q96RL1 719 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 IL23AQ9NPF7 189 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 CEP126Q9P2H0 1117 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 PCDHA11Q9Y5I1 949 aa16.88■□□□□ 0.29
HMGCR-208ENST00000509431 COBLO75128 1261 aa16.87■□□□□ 0.29
HMGCR-208ENST00000509431 FGBP02675 491 aa16.87■□□□□ 0.29
HMGCR-208ENST00000509431 ALADP13716 330 aa16.87■□□□□ 0.29
HMGCR-208ENST00000509431 FEZ1Q99689 392 aa16.87■□□□□ 0.29
HMGCR-208ENST00000509431 SPDYE16A6NNV3 312 aaPredicted RBP16.86■□□□□ 0.29
HMGCR-208ENST00000509431 ST18O60284 1047 aa16.86■□□□□ 0.29
HMGCR-208ENST00000509431 GDF11O95390 407 aa16.86■□□□□ 0.29
HMGCR-208ENST00000509431 ACLYP53396 1101 aa16.86■□□□□ 0.29
HMGCR-208ENST00000509431 CCDC102BQ68D86 513 aa16.86■□□□□ 0.29
HMGCR-208ENST00000509431 TEX11Q8IYF3 940 aa16.86■□□□□ 0.29
HMGCR-208ENST00000509431 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
HMGCR-208ENST00000509431 MAML3Q96JK9 1138 aa16.86■□□□□ 0.29
HMGCR-208ENST00000509431 MOV10L1Q9BXT6 1211 aaKnown RBP16.86■□□□□ 0.29
HMGCR-208ENST00000509431 AKR1A1P14550 325 aa16.85■□□□□ 0.29
HMGCR-208ENST00000509431 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
HMGCR-208ENST00000509431 ATG9AQ7Z3C6 839 aa16.85■□□□□ 0.29
HMGCR-208ENST00000509431 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
HMGCR-208ENST00000509431 ELP1O95163 1332 aa16.85■□□□□ 0.29
HMGCR-208ENST00000509431 ZNFX1Q9P2E3 1918 aaKnown RBP16.84■□□□□ 0.29
HMGCR-208ENST00000509431 TLR3O15455 904 aaKnown RBP16.84■□□□□ 0.29
HMGCR-208ENST00000509431 VCAM1P19320 739 aa16.84■□□□□ 0.29
HMGCR-208ENST00000509431 RFX5P48382 616 aaPredicted RBP16.84■□□□□ 0.29
HMGCR-208ENST00000509431 SPATC1LQ9H0A9 340 aa16.84■□□□□ 0.29
HMGCR-208ENST00000509431 KIAA1683Q9H0B3 1180 aa16.84■□□□□ 0.29
HMGCR-208ENST00000509431 CD320Q9NPF0 282 aa16.84■□□□□ 0.29
HMGCR-208ENST00000509431 ADAMTS4O75173 837 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 CIAO1O76071 339 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 ERCC3P19447 782 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 CDK7P50613 346 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 ZYXQ15942 572 aaKnown RBP16.83■□□□□ 0.28
HMGCR-208ENST00000509431 SHROOM1Q2M3G4 852 aaPredicted RBP16.83■□□□□ 0.28
HMGCR-208ENST00000509431 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 WWC1Q8IX03 1113 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 ZNF384Q8TF68 577 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 GLT1D1Q96MS3 346 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 NOL10Q9BSC4 688 aaKnown RBP16.83■□□□□ 0.28
HMGCR-208ENST00000509431 MROH8Q9H579 483 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 BRWD1Q9NSI6 2320 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 FANCIQ9NVI1 1328 aa16.83■□□□□ 0.28
HMGCR-208ENST00000509431 RABGGTBP53611 331 aa16.82■□□□□ 0.28
HMGCR-208ENST00000509431 GJD3Q8N144 294 aa16.82■□□□□ 0.28
HMGCR-208ENST00000509431 NSUN4Q96CB9 384 aaKnown RBP16.82■□□□□ 0.28
HMGCR-208ENST00000509431 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
HMGCR-208ENST00000509431 HOXC10Q9NYD6 342 aa16.82■□□□□ 0.28
HMGCR-208ENST00000509431 SLC4A7Q9Y6M7 1214 aa16.82■□□□□ 0.28
HMGCR-208ENST00000509431 TRANK1O15050 2925 aa16.82■□□□□ 0.28
HMGCR-208ENST00000509431 A0A0G2JMZ2 1700 aa16.82■□□□□ 0.28
HMGCR-208ENST00000509431 ZDBF2Q9HCK1 2354 aa16.81■□□□□ 0.28
HMGCR-208ENST00000509431 ZNF318Q5VUA4 2279 aa16.81■□□□□ 0.28
HMGCR-208ENST00000509431 GH2P01242 217 aa16.81■□□□□ 0.28
HMGCR-208ENST00000509431 PLCG2P16885 1265 aa16.81■□□□□ 0.28
HMGCR-208ENST00000509431 OTOP2Q7RTS6 562 aa16.81■□□□□ 0.28
HMGCR-208ENST00000509431 MB21D1Q8N884 522 aa16.81■□□□□ 0.28
HMGCR-208ENST00000509431 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
HMGCR-208ENST00000509431 RPAP3Q9H6T3 665 aaPredicted RBP16.81■□□□□ 0.28
HMGCR-208ENST00000509431 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
HMGCR-208ENST00000509431 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
HMGCR-208ENST00000509431 ARVCFO00192 962 aa16.8■□□□□ 0.28
HMGCR-208ENST00000509431 HLA-DOAP06340 250 aa16.8■□□□□ 0.28
HMGCR-208ENST00000509431 FCER1AP12319 257 aa16.8■□□□□ 0.28
HMGCR-208ENST00000509431 COG2Q14746 738 aa16.8■□□□□ 0.28
HMGCR-208ENST00000509431 KCNA10Q16322 511 aa16.8■□□□□ 0.28
HMGCR-208ENST00000509431 DIS3Q9Y2L1 958 aaKnown RBP16.8■□□□□ 0.28
HMGCR-208ENST00000509431 FOCADQ5VW36 1801 aa16.8■□□□□ 0.28
HMGCR-208ENST00000509431 SYNRGQ9UMZ2 1314 aa16.79■□□□□ 0.28
HMGCR-208ENST00000509431 RFXAPO00287 272 aa16.79■□□□□ 0.28
HMGCR-208ENST00000509431 BAG3O95817 575 aa16.79■□□□□ 0.28
HMGCR-208ENST00000509431 MYOGP15173 224 aa16.79■□□□□ 0.28
HMGCR-208ENST00000509431 CST5P28325 142 aaPredicted RBP16.79■□□□□ 0.28
HMGCR-208ENST00000509431 TMEM67Q5HYA8 995 aa16.79■□□□□ 0.28
HMGCR-208ENST00000509431 CCSAPQ6IQ19 270 aaPredicted RBP16.79■□□□□ 0.28
HMGCR-208ENST00000509431 FAM178BQ8IXR5 827 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms