RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
SDHA-210ENST00000509420 SLC4A4Q9Y6R1 1079 aa16.08■□□□□ 0.16
SDHA-210ENST00000509420 M0R2C6 588 aa16.07■□□□□ 0.16
SDHA-210ENST00000509420 COLQQ9Y215 455 aaPredicted RBP16.07■□□□□ 0.16
SDHA-210ENST00000509420 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
SDHA-210ENST00000509420 LAMA2P24043 3122 aaKnown RBP16.07■□□□□ 0.16
SDHA-210ENST00000509420 RPTORQ8N122 1335 aa16.06■□□□□ 0.16
SDHA-210ENST00000509420 CACNB2Q08289 660 aaPredicted RBP16.06■□□□□ 0.16
SDHA-210ENST00000509420 SBK1Q52WX2 424 aa16.06■□□□□ 0.16
SDHA-210ENST00000509420 PLEKHH3Q7Z736 793 aa16.06■□□□□ 0.16
SDHA-210ENST00000509420 SOCS4Q8WXH5 440 aa16.06■□□□□ 0.16
SDHA-210ENST00000509420 CRBNQ96SW2 442 aa16.06■□□□□ 0.16
SDHA-210ENST00000509420 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
SDHA-210ENST00000509420 MPHOSPH10O00566 681 aaKnown RBP16.05■□□□□ 0.16
SDHA-210ENST00000509420 RNF113AO15541 343 aaKnown RBP16.05■□□□□ 0.16
SDHA-210ENST00000509420 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
SDHA-210ENST00000509420 RASA1P20936 1047 aa16.05■□□□□ 0.16
SDHA-210ENST00000509420 GRB14Q14449 540 aa16.05■□□□□ 0.16
SDHA-210ENST00000509420 LHX8Q68G74 356 aa16.05■□□□□ 0.16
SDHA-210ENST00000509420 APPBP2Q92624 585 aa16.05■□□□□ 0.16
SDHA-210ENST00000509420 SEC62Q99442 399 aaKnown RBP16.05■□□□□ 0.16
SDHA-210ENST00000509420 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
SDHA-210ENST00000509420 TTC41PQ6P2S7 1318 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 IGKV6D-41A0A0C4DH26 115 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 HOXC6P09630 235 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 PTPREP23469 700 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
SDHA-210ENST00000509420 FXR1P51114 621 aaKnown RBP eCLIP16.04■□□□□ 0.16
SDHA-210ENST00000509420 ICA1Q05084 483 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 ZSCAN25Q6NSZ9 544 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 NPLOC4Q8TAT6 608 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 PAWRQ96IZ0 340 aaKnown RBP16.04■□□□□ 0.16
SDHA-210ENST00000509420 APBA2Q99767 749 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 MOV10L1Q9BXT6 1211 aaKnown RBP16.04■□□□□ 0.16
SDHA-210ENST00000509420 VCPKMTQ9H867 229 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
SDHA-210ENST00000509420 PFASO15067 1338 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 GPAA1O43292 621 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 EEF2P13639 858 aaKnown RBP16.03■□□□□ 0.16
SDHA-210ENST00000509420 DSG3P32926 999 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 RGS2P41220 211 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 MAP2K5Q13163 448 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 COG2Q14746 738 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 GIMAP6Q6P9H5 292 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 TRPV1Q8NER1 839 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 REPS2Q8NFH8 660 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 CCDC17Q96LX7 622 aa16.03■□□□□ 0.16
SDHA-210ENST00000509420 ARPP21Q9UBL0 812 aaPredicted RBP16.03■□□□□ 0.16
SDHA-210ENST00000509420 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.16
SDHA-210ENST00000509420 MYH4Q9Y623 1939 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 SLC15A5A6NIM6 579 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
SDHA-210ENST00000509420 COL6A1P12109 1028 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.16
SDHA-210ENST00000509420 LPAR1Q92633 364 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 ATG4CQ96DT6 458 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 SPATC1LQ9H0A9 340 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 HMX1Q9NP08 348 aaPredicted RBP16.02■□□□□ 0.16
SDHA-210ENST00000509420 FBXO28Q9NVF7 368 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
SDHA-210ENST00000509420 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
SDHA-210ENST00000509420 ZMYM1Q5SVZ6 1142 aa16.01■□□□□ 0.15
SDHA-210ENST00000509420 ANKLE1Q8NAG6 615 aa16.01■□□□□ 0.15
SDHA-210ENST00000509420 TANGO6Q9C0B7 1094 aa16.01■□□□□ 0.15
SDHA-210ENST00000509420 WDR46O15213 610 aaKnown RBP16■□□□□ 0.15
SDHA-210ENST00000509420 COBLO75128 1261 aa16■□□□□ 0.15
SDHA-210ENST00000509420 CAPN2P17655 700 aa16■□□□□ 0.15
SDHA-210ENST00000509420 MX1P20591 662 aa16■□□□□ 0.15
SDHA-210ENST00000509420 HDAC1Q13547 482 aaPredicted RBP16■□□□□ 0.15
SDHA-210ENST00000509420 TMEM132BQ14DG7 1078 aa16■□□□□ 0.15
SDHA-210ENST00000509420 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
SDHA-210ENST00000509420 SHCBP1Q8NEM2 672 aa16■□□□□ 0.15
SDHA-210ENST00000509420 DPF3Q92784 378 aa16■□□□□ 0.15
SDHA-210ENST00000509420 KANSL2Q9H9L4 492 aa16■□□□□ 0.15
SDHA-210ENST00000509420 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
SDHA-210ENST00000509420 STAP2Q9UGK3 403 aa16■□□□□ 0.15
SDHA-210ENST00000509420 GLRX3O76003 335 aaKnown RBP15.99■□□□□ 0.15
SDHA-210ENST00000509420 ZFYP08048 801 aaPredicted RBP15.99■□□□□ 0.15
SDHA-210ENST00000509420 ERCC3P19447 782 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 CCNA1P78396 465 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 TRMT44Q8IYL2 757 aaKnown RBP15.99■□□□□ 0.15
SDHA-210ENST00000509420 IFNL3Q8IZI9 196 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 GPATCH3Q96I76 525 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 HTATIP2Q9BUP3 242 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 ARHGEF10LQ9HCE6 1279 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 HOXC10Q9NYD6 342 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 ZNF214Q9UL59 606 aaPredicted RBP15.99■□□□□ 0.15
SDHA-210ENST00000509420 PLXNA1Q9UIW2 1896 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 PLIN4Q96Q06 1357 aa15.99■□□□□ 0.15
SDHA-210ENST00000509420 PRDM1O75626 825 aa15.98■□□□□ 0.15
SDHA-210ENST00000509420 FLOT1O75955 427 aa15.98■□□□□ 0.15
SDHA-210ENST00000509420 CYBAP13498 195 aa15.98■□□□□ 0.15
SDHA-210ENST00000509420 ADORA2AP29274 412 aa15.98■□□□□ 0.15
SDHA-210ENST00000509420 CYP2C19P33261 490 aa15.98■□□□□ 0.15
SDHA-210ENST00000509420 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
SDHA-210ENST00000509420 NUP88Q99567 741 aaPredicted RBP15.98■□□□□ 0.15
SDHA-210ENST00000509420 COL6A3P12111 3177 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms