RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 USP17L19D6RCP7 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L20D6RJB6 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 TTLL1O95922 423 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 USP17L24Q0WX57 530 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 LSG1Q9H089 658 aaKnown RBP23.86■■□□□ 1.41
HOXC6-204ENST00000509328 GOPCQ9HD26 462 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 CLIP2Q9UDT6 1046 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 CPA4Q9UI42 421 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 SYNPO2Q9UMS6 1093 aa23.86■■□□□ 1.41
HOXC6-204ENST00000509328 ESR2Q92731 530 aa23.85■■□□□ 1.41
HOXC6-204ENST00000509328 MKL1Q969V6 931 aa23.85■■□□□ 1.41
HOXC6-204ENST00000509328 ANO2Q9NQ90 1003 aa23.85■■□□□ 1.41
HOXC6-204ENST00000509328 NEDD4P46934 1319 aa23.84■■□□□ 1.41
HOXC6-204ENST00000509328 PARP14Q460N5 1801 aa23.84■■□□□ 1.41
HOXC6-204ENST00000509328 KIAA1755Q5JYT7 1200 aa23.84■■□□□ 1.41
HOXC6-204ENST00000509328 COL13A1Q5TAT6 717 aaPredicted RBP23.84■■□□□ 1.41
HOXC6-204ENST00000509328 CATSPERGQ6ZRH7 1159 aa23.84■■□□□ 1.41
HOXC6-204ENST00000509328 ERO1AQ96HE7 468 aa23.84■■□□□ 1.41
HOXC6-204ENST00000509328 RPAP3Q9H6T3 665 aaPredicted RBP23.84■■□□□ 1.41
HOXC6-204ENST00000509328 CNNM2Q9H8M5 875 aa23.84■■□□□ 1.41
HOXC6-204ENST00000509328 IL17RBQ9NRM6 502 aa23.84■■□□□ 1.41
HOXC6-204ENST00000509328 RBM8AQ9Y5S9 174 aaKnown RBP23.84■■□□□ 1.41
HOXC6-204ENST00000509328 MGAMO43451 1857 aa23.83■■□□□ 1.41
HOXC6-204ENST00000509328 CYP21A2P08686 494 aa23.83■■□□□ 1.41
HOXC6-204ENST00000509328 BCRP11274 1271 aa23.83■■□□□ 1.41
HOXC6-204ENST00000509328 GCLCP48506 637 aaPredicted RBP23.83■■□□□ 1.41
HOXC6-204ENST00000509328 SPICE1Q8N0Z3 855 aa23.83■■□□□ 1.41
HOXC6-204ENST00000509328 KRT23Q9C075 422 aa23.83■■□□□ 1.41
HOXC6-204ENST00000509328 TCP11L1Q9NUJ3 509 aa23.83■■□□□ 1.41
HOXC6-204ENST00000509328 RLFQ13129 1914 aa23.82■■□□□ 1.4
HOXC6-204ENST00000509328 WDR46O15213 610 aaKnown RBP23.82■■□□□ 1.4
HOXC6-204ENST00000509328 NMT2O60551 498 aa23.82■■□□□ 1.4
HOXC6-204ENST00000509328 P2RX7Q99572 595 aaKnown RBP23.82■■□□□ 1.4
HOXC6-204ENST00000509328 NOVP48745 357 aa23.81■■□□□ 1.4
HOXC6-204ENST00000509328 HERVK_113P62684 666 aa23.81■■□□□ 1.4
HOXC6-204ENST00000509328 CD99L2Q8TCZ2 262 aa23.81■■□□□ 1.4
HOXC6-204ENST00000509328 GTF3C2Q8WUA4 911 aaPredicted RBP23.81■■□□□ 1.4
HOXC6-204ENST00000509328 TANGO6Q9C0B7 1094 aa23.81■■□□□ 1.4
HOXC6-204ENST00000509328 STX8Q9UNK0 236 aa23.81■■□□□ 1.4
HOXC6-204ENST00000509328 B4E1Z4 1266 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 F5H6K3 240 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 RAD21O60216 631 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 KDM4AO75164 1064 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 KLRC3Q07444 240 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 KIF22Q14807 665 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 CTU1Q7Z7A3 348 aaKnown RBP23.8■■□□□ 1.4
HOXC6-204ENST00000509328 LRRC47Q8N1G4 583 aaKnown RBP23.8■■□□□ 1.4
HOXC6-204ENST00000509328 ANKRD13CQ8N6S4 541 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 GMCL1P1Q8NEA9 526 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 ZSWIM8A7E2V4 1837 aa23.8■■□□□ 1.4
HOXC6-204ENST00000509328 NDUFB10O96000 172 aa23.79■■□□□ 1.4
HOXC6-204ENST00000509328 LACTBP83111 547 aaPredicted RBP23.79■■□□□ 1.4
HOXC6-204ENST00000509328 TRDNQ13061 729 aa23.79■■□□□ 1.4
HOXC6-204ENST00000509328 ARHGEF6Q15052 776 aa23.79■■□□□ 1.4
HOXC6-204ENST00000509328 FAM110CQ1W6H9 321 aa23.79■■□□□ 1.4
HOXC6-204ENST00000509328 NKX2-3Q8TAU0 364 aa23.79■■□□□ 1.4
HOXC6-204ENST00000509328 COG2Q14746 738 aa23.78■■□□□ 1.4
HOXC6-204ENST00000509328 CCDC178Q5BJE1 867 aa23.78■■□□□ 1.4
HOXC6-204ENST00000509328 IQCA1Q86XH1 822 aa23.78■■□□□ 1.4
HOXC6-204ENST00000509328 TTC14Q96N46 770 aa23.78■■□□□ 1.4
HOXC6-204ENST00000509328 HOXC10Q9NYD6 342 aa23.78■■□□□ 1.4
HOXC6-204ENST00000509328 ZSWIM5Q9P217 1185 aa23.78■■□□□ 1.4
HOXC6-204ENST00000509328 E7EWF7 191 aa23.77■■□□□ 1.4
HOXC6-204ENST00000509328 NECTIN1Q15223 517 aa23.77■■□□□ 1.4
HOXC6-204ENST00000509328 FAM83BQ5T0W9 1011 aa23.77■■□□□ 1.4
HOXC6-204ENST00000509328 LBX2Q6XYB7 198 aa23.77■■□□□ 1.4
HOXC6-204ENST00000509328 MORF4L1Q9UBU8 362 aa23.77■■□□□ 1.4
HOXC6-204ENST00000509328 A0A0G2JMZ2 1700 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 COL11A1P12107 1806 aaPredicted RBP23.76■■□□□ 1.39
HOXC6-204ENST00000509328 SPDYE16A6NNV3 312 aaPredicted RBP23.76■■□□□ 1.39
HOXC6-204ENST00000509328 FLOT1O75955 427 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 TOP1P11387 765 aaKnown RBP23.76■■□□□ 1.39
HOXC6-204ENST00000509328 CREB3L3Q68CJ9 461 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 SLFN13Q68D06 897 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 NCOA7Q8NI08 942 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 ZKSCAN3Q9BRR0 538 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 RBPJLQ9UBG7 517 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 TAF6LQ9Y6J9 622 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 MYPNQ86TC9 1320 aa23.76■■□□□ 1.39
HOXC6-204ENST00000509328 SLC27A2O14975 620 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 DSG3P32926 999 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 RNF20Q5VTR2 975 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 RCSD1Q6JBY9 416 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 STOX1Q6ZVD7 989 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 RALYLQ86SE5 291 aaKnown RBP23.75■■□□□ 1.39
HOXC6-204ENST00000509328 DGKHQ86XP1 1220 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 GPRC5AQ8NFJ5 357 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 ZSCAN10Q96SZ4 725 aaPredicted RBP23.75■■□□□ 1.39
HOXC6-204ENST00000509328 TMEM47Q9BQJ4 181 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 ARHGAP39Q9C0H5 1083 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 EFCC1Q9HA90 598 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 RABGAP1Q9Y3P9 1069 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 TRIM17Q9Y577 477 aa23.75■■□□□ 1.39
HOXC6-204ENST00000509328 REC8O95072 547 aa23.74■■□□□ 1.39
HOXC6-204ENST00000509328 GNRH1P01148 92 aa23.74■■□□□ 1.39
HOXC6-204ENST00000509328 PSMC4P43686 418 aa23.74■■□□□ 1.39
HOXC6-204ENST00000509328 CAP1Q01518 475 aa23.74■■□□□ 1.39
HOXC6-204ENST00000509328 PKN2Q16513 984 aaKnown RBP23.74■■□□□ 1.39
HOXC6-204ENST00000509328 POTEEQ6S8J3 1075 aa23.74■■□□□ 1.39
HOXC6-204ENST00000509328 OTOP1Q7RTM1 612 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms