RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CAP2P40123 477 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 USP5P45974 858 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 KIAA1755Q5JYT7 1200 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 TTC22Q5TAA0 569 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 TMED8Q6PL24 325 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 ERO1BQ86YB8 467 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 DDX12PQ92771 950 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 CFHR5Q9BXR6 569 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 CRNKL1Q9BZJ0 848 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 SAGE1Q9NXZ1 904 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 CSADQ9Y600 493 aa8.68□□□□□ -1.02
TOPBP1-207ENST00000509162 CCL15-CCL14A0A0B4J2E2 113 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 A0A0G2JLL6 359 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 ERC2O15083 957 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 TRPA1O75762 1119 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 TBC1D8O95759 1140 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 AKR1B1P15121 316 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 MAP2K1Q02750 393 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 PPATQ06203 517 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 CRHR2Q13324 411 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 CCL15Q16663 113 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 TREML2Q5T2D2 321 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 C12orf60Q5U649 245 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 RASGRP2Q7LDG7 609 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 PRRT2Q7Z6L0 340 aaPredicted RBP8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 SIAH1Q8IUQ4 282 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 ACER1Q8TDN7 264 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 EVI5LQ96CN4 794 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 SLC10A4Q96EP9 437 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 DHX36Q9H2U1 1008 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 PI4KBQ9UBF8 816 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 HERC5Q9UII4 1024 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 SLC4A4Q9Y6R1 1079 aa8.67□□□□□ -1.02
TOPBP1-207ENST00000509162 PLXNB2O15031 1838 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 PLIN4Q96Q06 1357 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 A0A1W2PRG0 241 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 MANSC4A6NHS7 340 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 TRIM75PA6NK02 468 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 USP17L12C9JPN9 530 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 USP17L21D6R901 530 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 PEX10O60683 326 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 CTNND1O60716 968 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 GH2P01242 217 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 SDSP20132 328 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 COL9A3Q14050 684 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 PROX2Q3B8N5 592 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 THSD4Q6ZMP0 1018 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 C16orf86Q6ZW13 317 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 TBC1D10CQ8IV04 446 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 NOL10Q9BSC4 688 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 INCENPQ9NQS7 918 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 NPDC1Q9NQX5 325 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 SERPINB13Q9UIV8 391 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 TAF6LQ9Y6J9 622 aa8.66□□□□□ -1.02
TOPBP1-207ENST00000509162 IGKV6D-41A0A0C4DH26 115 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 ZFYP08048 801 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 RASA1P20936 1047 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 MTMR2Q13614 643 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 SEPT2Q15019 361 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 SBK1Q52WX2 424 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 LAPTM4BQ86VI4 370 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 ZNF296Q8WUU4 475 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 WNT2BQ93097 391 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 HOOK2Q96ED9 719 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 ARHGAP39Q9C0H5 1083 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 ATP8A2Q9NTI2 1148 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 ZHX2Q9Y6X8 837 aa8.65□□□□□ -1.02
TOPBP1-207ENST00000509162 CCDC171Q6TFL3 1326 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 A6NJR5 290 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 HLA-DOAP06340 250 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 CYP2C8P10632 490 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 CDK8P49336 464 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 GTF2A2P52657 109 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 HMGCS2P54868 508 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 SREBF2Q12772 1141 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 SNAPC2Q13487 334 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 ZSCAN25Q6NSZ9 544 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 CERS3Q8IU89 383 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 IFNL3Q8IZI9 196 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 STK11IPQ8N1F8 1099 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 WDR18Q9BV38 432 aa8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 ARPP21Q9UBL0 812 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-207ENST00000509162 ZMYM6O95789 1325 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 NEDD4P46934 1319 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 TRIM6-TRIM34B2RNG4 842 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 GPR25O00155 361 aa8.63□□□□□ -1.03
TOPBP1-207ENST00000509162 CXCL11O14625 94 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms