RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 SERTM1A2A2V5 107 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 OIP5O43482 229 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 DKK1O94907 266 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 MAPTP10636 758 aaKnown RBP9.41□□□□□ -0.9
CCSER1-208ENST00000509109 CD33P20138 364 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 MMP14P50281 582 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 HIRAP54198 1017 aaPredicted RBP9.41□□□□□ -0.9
CCSER1-208ENST00000509109 NOGQ13253 232 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 CYP4F22Q6NT55 531 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 G2E3Q7L622 706 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 GALNT6Q8NCL4 622 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
CCSER1-208ENST00000509109 SCARF2Q96GP6 870 aaPredicted RBP9.41□□□□□ -0.9
CCSER1-208ENST00000509109 PLA2G12BQ9BX93 195 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 ANKRD2Q9GZV1 360 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 GGA3Q9NZ52 723 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 LEMD3Q9Y2U8 911 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 A0A1B0GUL6 1792 aa9.41□□□□□ -0.9
CCSER1-208ENST00000509109 POLR2AP24928 1970 aaKnown RBP9.41□□□□□ -0.9
CCSER1-208ENST00000509109 PITPNM2Q9BZ72 1349 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 SHTN1A0MZ66 631 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 GDF11O95390 407 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 KCNJ4P48050 445 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 CCT4P50991 539 aaKnown RBP9.4□□□□□ -0.9
CCSER1-208ENST00000509109 LBX1P52954 281 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 HUNKP57058 714 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
CCSER1-208ENST00000509109 TNP2Q05952 138 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 EXOSC9Q06265 439 aaKnown RBP9.4□□□□□ -0.9
CCSER1-208ENST00000509109 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCSER1-208ENST00000509109 LRRC69Q6ZNQ3 347 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 TMEM151AQ8N4L1 468 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 KCTD17Q8N5Z5 321 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 C2orf69Q8N8R5 385 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 MINPP1Q9UNW1 487 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 HCN4Q9Y3Q4 1203 aa9.4□□□□□ -0.9
CCSER1-208ENST00000509109 ZNF646O15015 1829 aaPredicted RBP9.4□□□□□ -0.91
CCSER1-208ENST00000509109 PAPPA2Q9BXP8 1791 aa9.4□□□□□ -0.91
CCSER1-208ENST00000509109 ANKRD18BA2A2Z9 1011 aa9.39□□□□□ -0.91
CCSER1-208ENST00000509109 SHISA8B8ZZ34 492 aa9.39□□□□□ -0.91
CCSER1-208ENST00000509109 VAMP4O75379 141 aa9.39□□□□□ -0.91
CCSER1-208ENST00000509109 HSPA8P11142 646 aaKnown RBP9.39□□□□□ -0.91
CCSER1-208ENST00000509109 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
CCSER1-208ENST00000509109 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
CCSER1-208ENST00000509109 FAM9BQ8IZU0 186 aa9.39□□□□□ -0.91
CCSER1-208ENST00000509109 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
CCSER1-208ENST00000509109 GBA2Q9HCG7 927 aaPredicted RBP9.39□□□□□ -0.91
CCSER1-208ENST00000509109 MYOZ2Q9NPC6 264 aa9.39□□□□□ -0.91
CCSER1-208ENST00000509109 DNMT3AQ9Y6K1 912 aaPredicted RBP9.39□□□□□ -0.91
CCSER1-208ENST00000509109 ZNF804BA4D1E1 1349 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 EML1O00423 815 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 EGFRP00533 1210 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 PSMA6P60900 246 aaKnown RBP9.38□□□□□ -0.91
CCSER1-208ENST00000509109 IFIT5Q13325 482 aaKnown RBP9.38□□□□□ -0.91
CCSER1-208ENST00000509109 TAF7LQ5H9L4 462 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 STRIP1Q5VSL9 837 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 KCNQ5Q9NR82 932 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 GDF2Q9UK05 429 aaPredicted RBP9.38□□□□□ -0.91
CCSER1-208ENST00000509109 CHMP3Q9Y3E7 222 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 ECM29Q5VYK3 1845 aa9.38□□□□□ -0.91
CCSER1-208ENST00000509109 AKAP11Q9UKA4 1901 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 COL1A1P02452 1464 aaPredicted RBP9.37□□□□□ -0.91
CCSER1-208ENST00000509109 ADM5C9JUS6 153 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 M0R2N6 131 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 GRM8O00222 908 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 PPP1R12BO60237 982 aaPredicted RBP9.37□□□□□ -0.91
CCSER1-208ENST00000509109 CSF1RP07333 972 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 CASP7P55210 303 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 SEC13P55735 322 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 FKBP1BP68106 108 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 CCDC57Q2TAC2 916 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 DACT2Q5SW24 774 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 ANGEL2Q5VTE6 544 aaKnown RBP9.37□□□□□ -0.91
CCSER1-208ENST00000509109 RGMBQ6NW40 437 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 RHPN1Q8TCX5 695 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 C9orf78Q9NZ63 289 aaPredicted RBP9.37□□□□□ -0.91
CCSER1-208ENST00000509109 HDAC9Q9UKV0 1011 aa9.37□□□□□ -0.91
CCSER1-208ENST00000509109 ARAP2Q8WZ64 1704 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 AOC2O75106 756 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 ALDH1L1O75891 902 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 NF2P35240 595 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 CHRNDQ07001 517 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 DPYDQ12882 1025 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 PTK7Q13308 1070 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 BEND3Q5T5X7 828 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 ZNF804AQ7Z570 1209 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 GOLGA6L1Q8N7Z2 621 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 SCG3Q8WXD2 468 aaKnown RBP9.36□□□□□ -0.91
CCSER1-208ENST00000509109 CDCA5Q96FF9 252 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 GMLQ99445 158 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 HINFPQ9BQA5 517 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 SRCIN1Q9C0H9 1055 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L10C9JJH3 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
CCSER1-208ENST00000509109 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms