RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 NOP58Q9Y2X3 529 aaKnown RBP19.46■□□□□ 0.71
CXCL1-202ENST00000509101 BAZ2AQ9UIF9 1905 aaKnown RBP19.45■□□□□ 0.7
CXCL1-202ENST00000509101 CDH23Q9H251 3354 aa19.45■□□□□ 0.7
CXCL1-202ENST00000509101 KBTBD13C9JR72 458 aa19.45■□□□□ 0.7
CXCL1-202ENST00000509101 TANGO6Q9C0B7 1094 aa19.45■□□□□ 0.7
CXCL1-202ENST00000509101 PRDM5Q9NQX1 630 aaPredicted RBP19.45■□□□□ 0.7
CXCL1-202ENST00000509101 MPHOSPH10O00566 681 aaKnown RBP19.44■□□□□ 0.7
CXCL1-202ENST00000509101 IGHA2P01877 340 aa19.44■□□□□ 0.7
CXCL1-202ENST00000509101 MYCNP04198 464 aaPredicted RBP19.44■□□□□ 0.7
CXCL1-202ENST00000509101 POLR3DP05423 398 aaPredicted RBP19.44■□□□□ 0.7
CXCL1-202ENST00000509101 EVX2Q03828 476 aa19.44■□□□□ 0.7
CXCL1-202ENST00000509101 OLFML2BQ68BL8 750 aa19.44■□□□□ 0.7
CXCL1-202ENST00000509101 RIOK1Q9BRS2 568 aaKnown RBP19.44■□□□□ 0.7
CXCL1-202ENST00000509101 A0A1W2PRG0 241 aa19.43■□□□□ 0.7
CXCL1-202ENST00000509101 GABPAQ06546 454 aa19.43■□□□□ 0.7
CXCL1-202ENST00000509101 C9orf50Q5SZB4 431 aa19.43■□□□□ 0.7
CXCL1-202ENST00000509101 SLC39A5Q6ZMH5 540 aa19.43■□□□□ 0.7
CXCL1-202ENST00000509101 ARRDC4Q8NCT1 418 aa19.43■□□□□ 0.7
CXCL1-202ENST00000509101 SPATC1LQ9H0A9 340 aa19.43■□□□□ 0.7
CXCL1-202ENST00000509101 SPTBN5Q9NRC6 3674 aaKnown RBP19.43■□□□□ 0.7
CXCL1-202ENST00000509101 SMCHD1A6NHR9 2005 aa19.42■□□□□ 0.7
CXCL1-202ENST00000509101 MAGEB6P1A0A0J9YX57 407 aa19.42■□□□□ 0.7
CXCL1-202ENST00000509101 ERCC3P19447 782 aa19.42■□□□□ 0.7
CXCL1-202ENST00000509101 COG2Q14746 738 aa19.42■□□□□ 0.7
CXCL1-202ENST00000509101 SHHQ15465 462 aa19.42■□□□□ 0.7
CXCL1-202ENST00000509101 TRIM60Q495X7 471 aa19.42■□□□□ 0.7
CXCL1-202ENST00000509101 ITPRIPQ8IWB1 547 aa19.42■□□□□ 0.7
CXCL1-202ENST00000509101 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
CXCL1-202ENST00000509101 PRUNE2Q8WUY3 3088 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 SEPT4O43236 478 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 STRNO43815 780 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 COBLO75128 1261 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 PLS1Q14651 629 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 TMED8Q6PL24 325 aaPredicted RBP19.41■□□□□ 0.7
CXCL1-202ENST00000509101 AACSQ86V21 672 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 SHCBP1Q8NEM2 672 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 BADQ92934 168 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 CRNKL1Q9BZJ0 848 aaKnown RBP19.41■□□□□ 0.7
CXCL1-202ENST00000509101 PDLIM7Q9NR12 457 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 MCM9Q9NXL9 1143 aa19.41■□□□□ 0.7
CXCL1-202ENST00000509101 SNX17Q15036 470 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 FAM47AQ5JRC9 791 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 KIAA1755Q5JYT7 1200 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 PRAMEF19Q5SWL8 479 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 NCAPG2Q86XI2 1143 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 FERMT2Q96AC1 680 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 CDX2Q99626 313 aaPredicted RBP19.4■□□□□ 0.7
CXCL1-202ENST00000509101 HOXC10Q9NYD6 342 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 EXOC6BQ9Y2D4 811 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 MYH7P12883 1935 aa19.4■□□□□ 0.7
CXCL1-202ENST00000509101 PDE6AP16499 860 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 ADCYAP1R1P41586 468 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 LRRC41Q15345 812 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 SAMD1Q6SPF0 538 aaPredicted RBP19.39■□□□□ 0.69
CXCL1-202ENST00000509101 CLEC10AQ8IUN9 316 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 MB21D1Q8N884 522 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 SLC44A5Q8NCS7 719 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 MAFAQ8NHW3 353 aaPredicted RBP19.39■□□□□ 0.69
CXCL1-202ENST00000509101 SDR42E1Q8WUS8 393 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 ATG4CQ96DT6 458 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 SLC5A4Q9NY91 659 aa19.39■□□□□ 0.69
CXCL1-202ENST00000509101 FLOT1O75955 427 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 CYP2D6P10635 497 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 RLBP1P12271 317 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 DSG3P32926 999 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 SLC9C2Q5TAH2 1124 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 CEP85Q6P2H3 762 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 SH3RF1Q7Z6J0 888 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 MAML3Q96JK9 1138 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 MROH8Q9H579 483 aa19.38■□□□□ 0.69
CXCL1-202ENST00000509101 ZNF532Q9HCE3 1301 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 TRIM43BA6NCK2 446 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 TTF1Q15361 905 aaPredicted RBP19.37■□□□□ 0.69
CXCL1-202ENST00000509101 TMEM179Q6ZVK1 233 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 ERC1Q8IUD2 1116 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 SPICE1Q8N0Z3 855 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 LCORLQ8N3X6 602 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 MYLIPQ8WY64 445 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 TRIM43Q96BQ3 446 aaPredicted RBP19.37■□□□□ 0.69
CXCL1-202ENST00000509101 SEMA6BQ9H3T3 888 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 IL1RAPL2Q9NP60 686 aa19.37■□□□□ 0.69
CXCL1-202ENST00000509101 CCER2I3L3R5 266 aa19.36■□□□□ 0.69
CXCL1-202ENST00000509101 SMAD3P84022 425 aaKnown RBP19.36■□□□□ 0.69
CXCL1-202ENST00000509101 ICA1Q05084 483 aa19.36■□□□□ 0.69
CXCL1-202ENST00000509101 ABRAQ8N0Z2 381 aa19.36■□□□□ 0.69
CXCL1-202ENST00000509101 DYNLL2Q96FJ2 89 aa19.36■□□□□ 0.69
CXCL1-202ENST00000509101 TTYH1Q9H313 450 aaPredicted RBP19.36■□□□□ 0.69
CXCL1-202ENST00000509101 ARHGEF10LQ9HCE6 1279 aa19.36■□□□□ 0.69
CXCL1-202ENST00000509101 DCP1AQ9NPI6 582 aaPredicted RBP19.36■□□□□ 0.69
CXCL1-202ENST00000509101 AKR1B1P15121 316 aa19.35■□□□□ 0.69
CXCL1-202ENST00000509101 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
CXCL1-202ENST00000509101 XPNPEP3Q9NQH7 507 aa19.35■□□□□ 0.69
CXCL1-202ENST00000509101 SWAP70Q9UH65 585 aa19.35■□□□□ 0.69
CXCL1-202ENST00000509101 GOLIM4O00461 696 aa19.34■□□□□ 0.69
CXCL1-202ENST00000509101 FCER1AP12319 257 aa19.34■□□□□ 0.69
CXCL1-202ENST00000509101 TLE2Q04725 743 aa19.34■□□□□ 0.69
CXCL1-202ENST00000509101 C1orf53Q5VUE5 145 aa19.34■□□□□ 0.69
CXCL1-202ENST00000509101 SH2D4AQ9H788 454 aa19.34■□□□□ 0.69
CXCL1-202ENST00000509101 VCPKMTQ9H867 229 aa19.34■□□□□ 0.69
CXCL1-202ENST00000509101 PHF24Q9UPV7 400 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms