RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 RPS26P62854 115 aaKnown RBP4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 VMACQ2NL98 169 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 TTBK2Q6IQ55 1244 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 TSPYL5Q86VY4 417 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 ZDHHC14Q8IZN3 488 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 DNAJB8Q8NHS0 232 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 SHISA4Q96DD7 197 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 GPATCH2Q9NW75 528 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 EBF1Q9UH73 591 aa4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 TTF2Q9UNY4 1162 aaKnown RBP4.42□□□□□ -1.7
DEPDC1B-204ENST00000509006 SLC22A31A6NKX4 558 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 PSPNO60542 156 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 EFEMP2O95967 443 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 PGRP06401 933 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 LDHBP07195 334 aaKnown RBP4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 AFF3P51826 1226 aaKnown RBP4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 EPHB3P54753 998 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 SEPT6Q14141 434 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 AGMOQ6ZNB7 445 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 SIRT2Q8IXJ6 389 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 MRPL41Q8IXM3 137 aaKnown RBP4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 DTWD2Q8NBA8 298 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 DHX38Q92620 1227 aaKnown RBP4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 DACT3Q96B18 629 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 TMEM87BQ96K49 555 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 SIGLEC10Q96LC7 697 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 FRMD6Q96NE9 622 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 GPR62Q9BZJ7 368 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 ADAM7Q9H2U9 754 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 TMPRSS5Q9H3S3 457 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 MBD1Q9UIS9 605 aaPredicted RBP4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 PCDHB5Q9Y5E4 795 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 IRAK3Q9Y616 596 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 TACC3Q9Y6A5 838 aa4.41□□□□□ -1.7
DEPDC1B-204ENST00000509006 GNA15P30679 374 aa4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 KCNA1Q09470 495 aa4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 ADGRF1Q5T601 910 aa4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 SYT8Q8NBV8 401 aa4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 PPP1R13LQ8WUF5 828 aa4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 EPB41L4AQ9HCS5 686 aaPredicted RBP4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 RNF19AQ9NV58 838 aa4.4□□□□□ -1.71
DEPDC1B-204ENST00000509006 OR14I1A6ND48 311 aa4.39□□□□□ -1.71
DEPDC1B-204ENST00000509006 NOTOA8MTQ0 251 aa4.39□□□□□ -1.71
DEPDC1B-204ENST00000509006 LRRN2O75325 713 aa4.39□□□□□ -1.71
DEPDC1B-204ENST00000509006 EIF4BP23588 611 aaKnown RBP4.39□□□□□ -1.71
DEPDC1B-204ENST00000509006 CHRNEQ04844 493 aa4.39□□□□□ -1.71
DEPDC1B-204ENST00000509006 SYTL4Q96C24 671 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1B-204ENST00000509006 AK5Q9Y6K8 562 aa4.39□□□□□ -1.71
DEPDC1B-204ENST00000509006 SHISA3A0PJX4 238 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 PRPF40AO75400 957 aaKnown RBP4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 LIG3P49916 1009 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 TEKQ02763 1124 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 DUSP4Q13115 394 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 SNX17Q15036 470 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 CCDC85BQ15834 202 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 SLC6A19Q695T7 634 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 SPPL2CQ8IUH8 684 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 ANKS4BQ8N8V4 417 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 ACSF2Q96CM8 615 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 BORCS6Q96GS4 357 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 G6PC3Q9BUM1 346 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 CEP131Q9UPN4 1083 aa4.38□□□□□ -1.71
DEPDC1B-204ENST00000509006 USP2O75604 605 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 TFE3P19532 575 aaPredicted RBP4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 SDHBP21912 280 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 VIPR1P32241 457 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 ERICH6BQ5W0A0 696 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 NLRX1Q86UT6 975 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 MCATQ8IVS2 390 aaKnown RBP4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 SP8Q8IXZ3 490 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 LINC01599Q8WXQ3 324 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 CNTD2Q9H8S5 307 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 SIRT5Q9NXA8 310 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 ADAM30Q9UKF2 790 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 KCNH3Q9ULD8 1083 aa4.37□□□□□ -1.71
DEPDC1B-204ENST00000509006 IRS4O14654 1257 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 N4BP3O15049 544 aa4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 RPL6Q02878 288 aaKnown RBP4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 EFEMP1Q12805 493 aa4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 ZXDCQ2QGD7 858 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 MEI1Q5TIA1 1274 aa4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 TMEFF1Q8IYR6 380 aa4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 CYB5D2Q8WUJ1 264 aa4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 TEPSINQ96N21 525 aa4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 DUSP9Q99956 384 aaKnown RBP4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 BDH2Q9BUT1 245 aa4.36□□□□□ -1.71
DEPDC1B-204ENST00000509006 LMNB1P20700 586 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 CDR1P51861 262 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 KRTAP1-1Q07627 177 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 MAP3K11Q16584 847 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 TSNAXIP1Q2TAA8 658 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 RNF141Q8WVD5 230 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 MIR1-1HGQ9H1L0 117 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 TLR6Q9Y2C9 796 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 CORINQ9Y5Q5 1042 aa4.35□□□□□ -1.71
DEPDC1B-204ENST00000509006 ZC3H12DA2A288 527 aaKnown RBP4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 UPK3BL1B0FP48 263 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 UPK3BL2E5RIL1 263 aa4.34□□□□□ -1.71
DEPDC1B-204ENST00000509006 HRKO00198 91 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms