RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 STAG1Q8WVM7 1258 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 MAP4K1Q92918 833 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-213ENST00000508848 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 TTLL1O95922 423 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 EEF2P13639 858 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 HOXD10P28358 340 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 COG2Q14746 738 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 KIF22Q14807 665 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 GMCL1P1Q8NEA9 526 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 FEZ1Q99689 392 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 GOPCQ9HD26 462 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 ADAMTS5Q9UNA0 930 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-213ENST00000508848 PARP14Q460N5 1801 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 EPB41L2O43491 1005 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 PLA2G6O60733 806 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 VCAM1P19320 739 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 HERVK_113P62684 666 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 TFAP4Q01664 338 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 IMMTQ16891 758 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 RCSD1Q6JBY9 416 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 FBXO46Q6PJ61 603 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 MFSD6Q6ZSS7 791 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 SMCR8Q8TEV9 937 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 ANKS1AQ92625 1134 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 P2RX7Q99572 595 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 HTTP42858 3142 aa12.55□□□□□ -0.4
POLR2J3-213ENST00000508848 FDX1P10109 184 aa12.54□□□□□ -0.4
POLR2J3-213ENST00000508848 CYP2C8P10632 490 aa12.54□□□□□ -0.4
POLR2J3-213ENST00000508848 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
POLR2J3-213ENST00000508848 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
POLR2J3-213ENST00000508848 EFCC1Q9HA90 598 aa12.54□□□□□ -0.4
POLR2J3-213ENST00000508848 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 F5H6K3 240 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 KLRC3Q07444 240 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 KIAA1211Q6ZU35 1233 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 OTOP1Q7RTM1 612 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 ESR2Q92731 530 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 GMCL1Q96IK5 515 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 ESYT1Q9BSJ8 1104 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 MTA3Q9BTC8 594 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 KRT23Q9C075 422 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 IL25Q9H293 177 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 IL17RBQ9NRM6 502 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
POLR2J3-213ENST00000508848 RANBP6O60518 1105 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 PRDM1O75626 825 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 CAPN2P17655 700 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 IRF5Q13568 498 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 DGKZQ13574 1117 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 CPA4Q9UI42 421 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
POLR2J3-213ENST00000508848 ATP2A1O14983 1001 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 CDC45O75419 566 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 MAPK4P31152 587 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 PSMC4P43686 418 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 FCGRTP55899 365 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 CCNA1P78396 465 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 PTH1RQ03431 593 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 NECTIN1Q15223 517 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 TSGA10IPQ3SY00 556 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 SHCBP1Q8NEM2 672 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 CD99L2Q8TCZ2 262 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 SRRDQ9UH36 339 aa12.51□□□□□ -0.41
POLR2J3-213ENST00000508848 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 CENPFP49454 3210 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 STRNO43815 780 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 CYP21A2P08686 494 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 ERVK-24P63145 666 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 FAM47AQ5JRC9 791 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 TBC1D10CQ8IV04 446 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 ANKRD13CQ8N6S4 541 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 CHURC1Q8WUH1 139 aa12.5□□□□□ -0.41
POLR2J3-213ENST00000508848 TRIM47Q96LD4 638 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms