RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 FGRP09769 529 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 LACTBP83111 547 aaPredicted RBP17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 IMMTQ16891 758 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 CATSPERGQ6ZRH7 1159 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 TANGO6Q9C0B7 1094 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 VCPKMTQ9H867 229 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 EFCC1Q9HA90 598 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 MTMR4Q9NYA4 1195 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 TRIM17Q9Y577 477 aa17.38■□□□□ 0.37
SH3TC1-216ENST00000508641 GREB1LQ9C091 1923 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 NMT2O60551 498 aa17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 PEX10O60683 326 aa17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 GCLCP48506 637 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 HERVK_113P62684 666 aa17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 ESYT1Q9BSJ8 1104 aa17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 RNF41Q9H4P4 317 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
SH3TC1-216ENST00000508641 FMNL1O95466 1100 aaPredicted RBP17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 TTLL1O95922 423 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 PSMC4P43686 418 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 ARHGEF6Q15052 776 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 KIAA1211Q6ZU35 1233 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 OTOP1Q7RTM1 612 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 STAG1Q8WVM7 1258 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 LPAR1Q92633 364 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 IL17RBQ9NRM6 502 aa17.36■□□□□ 0.37
SH3TC1-216ENST00000508641 CDC45O75419 566 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 CTGFP29279 349 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 LRRC47Q8N1G4 583 aaKnown RBP17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 NKX2-3Q8TAU0 364 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 CHMP4CQ96CF2 233 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 PAGR1Q9BTK6 254 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 STX8Q9UNK0 236 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 NEDD4P46934 1319 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 PLIN4Q96Q06 1357 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 ZSWIM8A7E2V4 1837 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 MYH4Q9Y623 1939 aa17.35■□□□□ 0.37
SH3TC1-216ENST00000508641 F5H6K3 240 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 PCP11498 1178 aaKnown RBP17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 KLRC3Q07444 240 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 COG2Q14746 738 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 CASC1Q6TDU7 716 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 MKL1Q969V6 931 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 TRIM47Q96LD4 638 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 TXNRD2Q9NNW7 524 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 RBPJLQ9UBG7 517 aa17.34■□□□□ 0.37
SH3TC1-216ENST00000508641 LAMA4Q16363 1823 aa17.33■□□□□ 0.37
SH3TC1-216ENST00000508641 B4E1Z4 1266 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 WDR46O15213 610 aaKnown RBP17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 FLOT1O75955 427 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 NDUFB10O96000 172 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 PKN2Q16513 984 aaKnown RBP17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 FAM83BQ5T0W9 1011 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 GPRC5AQ8NFJ5 357 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 ESR2Q92731 530 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 MAP4K1Q92918 833 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 ANO2Q9NQ90 1003 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 HOXC10Q9NYD6 342 aa17.33■□□□□ 0.36
SH3TC1-216ENST00000508641 KDM4AO75164 1064 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 CYP21A2P08686 494 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 FCGRTP55899 365 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 Q3C1V9 767 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 PPP4R3BQ5MIZ7 849 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 SLFN13Q68D06 897 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 FBXO46Q6PJ61 603 aaPredicted RBP17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 ABHD8Q96I13 439 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 ZKSCAN3Q9BRR0 538 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 MORF4L1Q9UBU8 362 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 PTPN22Q9Y2R2 807 aa17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
SH3TC1-216ENST00000508641 SPDYE16A6NNV3 312 aaPredicted RBP17.31■□□□□ 0.36
SH3TC1-216ENST00000508641 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
SH3TC1-216ENST00000508641 KRT23Q9C075 422 aa17.31■□□□□ 0.36
SH3TC1-216ENST00000508641 TCP11L1Q9NUJ3 509 aa17.31■□□□□ 0.36
SH3TC1-216ENST00000508641 FBXO28Q9NVF7 368 aa17.31■□□□□ 0.36
SH3TC1-216ENST00000508641 ISY1Q9ULR0 285 aaKnown RBP17.31■□□□□ 0.36
SH3TC1-216ENST00000508641 TAF6LQ9Y6J9 622 aa17.31■□□□□ 0.36
SH3TC1-216ENST00000508641 TNPO2O14787 897 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 CAPN15O75808 1086 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 CNMDO75829 334 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 MCCP23508 829 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 HOXD10P28358 340 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 DSG3P32926 999 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 ERVK-9P63128 1117 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 ERVK-24P63145 666 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 CNNM2Q9H8M5 875 aa17.3■□□□□ 0.36
SH3TC1-216ENST00000508641 BTBD7Q9P203 1132 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms