RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TTF2Q9UNY4 1162 aaKnown RBP5.87□□□□□ -1.47
SMARCA5-202ENST00000508573 ETV2O00321 342 aaPredicted RBP5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 MAFGO15525 162 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 PEX14O75381 377 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 CENPBP07199 599 aaPredicted RBP5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 LMNB1P20700 586 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 KIR3DL1P43629 444 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 HDLBPQ00341 1268 aaKnown RBP5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 ATP2B2Q01814 1243 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 KCNA10Q16322 511 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 PTPROQ16827 1216 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 CCDC144BQ3MJ40 725 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 SDE2Q6IQ49 451 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 AMIGO3Q86WK7 504 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 CREG2Q8IUH2 290 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 DHX38Q92620 1227 aaKnown RBP5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 TANGO6Q9C0B7 1094 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 ADAMTS10Q9H324 1103 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 SMG5Q9UPR3 1016 aaKnown RBP5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 TBX22Q9Y458 520 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 PCDHB5Q9Y5E4 795 aa5.86□□□□□ -1.47
SMARCA5-202ENST00000508573 TCAF2A6NFQ2 919 aa5.85□□□□□ -1.47
SMARCA5-202ENST00000508573 ESR1P03372 595 aa5.85□□□□□ -1.47
SMARCA5-202ENST00000508573 IGBP1P78318 339 aa5.85□□□□□ -1.47
SMARCA5-202ENST00000508573 RAD51AP2Q09MP3 1159 aa5.85□□□□□ -1.47
SMARCA5-202ENST00000508573 GAL3ST3Q96A11 431 aa5.85□□□□□ -1.47
SMARCA5-202ENST00000508573 BACH2Q9BYV9 841 aa5.85□□□□□ -1.47
SMARCA5-202ENST00000508573 PIF1Q9H611 641 aa5.85□□□□□ -1.47
SMARCA5-202ENST00000508573 B8ZZF3 427 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 GFRA2O00451 464 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 PGRP06401 933 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 TRHRP34981 398 aaPredicted RBP5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 ANAPC15P60006 121 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 FMR1Q06787 632 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 CIAPIN1Q6FI81 312 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 TTLL10Q6ZVT0 673 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 TMPRSS7Q7RTY8 843 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 NLGN1Q8N2Q7 840 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 MORC4Q8TE76 937 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 COX4I2Q96KJ9 171 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 DPH2Q9BQC3 489 aaPredicted RBP5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 TMEM59LQ9UK28 342 aa5.84□□□□□ -1.47
SMARCA5-202ENST00000508573 hCG_2014768A0A024R1R8 64 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 PRRG2O14669 202 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 TPP2P29144 1249 aaPredicted RBP5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 SETQ01105 290 aaPredicted RBP5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 SEPT6Q14141 434 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 LDLRAD1Q5T700 205 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 SLC6A19Q695T7 634 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 APBB1IPQ7Z5R6 666 aaPredicted RBP5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 PIWIL2Q8TC59 973 aaKnown RBP5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 EVI5LQ96CN4 794 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 SLC26A8Q96RN1 970 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 DUSP15Q9H1R2 295 aaPredicted RBP5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 TJP2Q9UDY2 1190 aa5.83□□□□□ -1.48
SMARCA5-202ENST00000508573 NUAK1O60285 661 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 HPXP02790 462 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 TCEAL1Q15170 157 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 CCDC85BQ15834 202 aaPredicted RBP5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 MAP3K11Q16584 847 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 SPTY2D1Q68D10 685 aaPredicted RBP5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 SMC5Q8IY18 1101 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 SGSM3Q96HU1 749 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 Q96M66 194 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 ASB16Q96NS5 453 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 PLCD4Q9BRC7 762 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 TINF2Q9BSI4 451 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 C19orf44Q9H6X5 657 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 CD320Q9NPF0 282 aa5.82□□□□□ -1.48
SMARCA5-202ENST00000508573 NCANO14594 1321 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 LDHBP07195 334 aaKnown RBP5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 INHBBP09529 407 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 MED14OSP0DP75 135 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 ETV3P41162 512 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 FAM50AQ14320 339 aaKnown RBP5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 MRPL41Q8IXM3 137 aaKnown RBP5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 JARID2Q92833 1246 aaPredicted RBP5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 TMEM87BQ96K49 555 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 IRF2BPLQ9H1B7 796 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 CHPF2Q9P2E5 772 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 MAGEC2Q9UBF1 373 aaPredicted RBP5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 CEP131Q9UPN4 1083 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 FAN1Q9Y2M0 1017 aa5.81□□□□□ -1.48
SMARCA5-202ENST00000508573 CCDC194A0A1B0GVG4 234 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 SCAMP3O14828 347 aaKnown RBP5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 GLDCP23378 1020 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 EIF4BP23588 611 aaKnown RBP5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 GTF2F1P35269 517 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 RPS26P62854 115 aaKnown RBP5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 RALBP1Q15311 655 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 PMM1Q92871 262 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 FRMD6Q96NE9 622 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 RNF32Q9H0A6 362 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 TRIT1Q9H3H1 467 aaKnown RBP5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 GPATCH2Q9NW75 528 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 TERF2IPQ9NYB0 399 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 DUSP13Q9UII6 198 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 TACC3Q9Y6A5 838 aa5.8□□□□□ -1.48
SMARCA5-202ENST00000508573 ATP2B1P20020 1258 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms