RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 VCAM1P19320 739 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 CYP2C19P33261 490 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 MRE11P49959 708 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 G3BP1Q13283 466 aaKnown RBP eCLIP11.5□□□□□ -0.57
NEDD9-211ENST00000508546 TMEM31Q5JXX7 168 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 WDR78Q5VTH9 848 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 C1orf53Q5VUE5 145 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 OLFML2BQ68BL8 750 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 SH3RF1Q7Z6J0 888 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 CDCA7LQ96GN5 454 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-211ENST00000508546 GAS2L1Q99501 681 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-211ENST00000508546 FEZ1Q99689 392 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 EHD4Q9H223 541 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 SAP30BPQ9UHR5 308 aaKnown RBP11.5□□□□□ -0.57
NEDD9-211ENST00000508546 PLXNA1Q9UIW2 1896 aa11.5□□□□□ -0.57
NEDD9-211ENST00000508546 FAM86C2PA6NEL3 165 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-211ENST00000508546 KBTBD13C9JR72 458 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 ADGRE1Q14246 886 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 CCDC85BQ15834 202 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-211ENST00000508546 ZYXQ15942 572 aaKnown RBP11.49□□□□□ -0.57
NEDD9-211ENST00000508546 CCDC158Q5M9N0 1113 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 TTC39AQ5SRH9 613 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-211ENST00000508546 CERS3Q8IU89 383 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 TIFAQ96CG3 184 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 PRDM12Q9H4Q4 367 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 SERPINB13Q9UIV8 391 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-211ENST00000508546 NAV1Q8NEY1 1877 aa11.49□□□□□ -0.57
NEDD9-211ENST00000508546 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 TRIM43BA6NCK2 446 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 SEPT4O43236 478 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 GNAI2P04899 355 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 BMP1P13497 986 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 ITGB8P26012 769 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
NEDD9-211ENST00000508546 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 CERKLQ49MI3 558 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-211ENST00000508546 DPP9Q86TI2 863 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 SHCBP1Q8NEM2 672 aa11.48□□□□□ -0.57
NEDD9-211ENST00000508546 TRIM43Q96BQ3 446 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-211ENST00000508546 GBF1Q92538 1859 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 ADORA2AP29274 412 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 KCNQ1P51787 676 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
NEDD9-211ENST00000508546 TFF2Q03403 129 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 TNNI3KQ59H18 835 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 ACER1Q8TDN7 264 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.577e-7■□□□□ 10.6
NEDD9-211ENST00000508546 DBNDD2Q9BQY9 259 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 MOV10L1Q9BXT6 1211 aaKnown RBP11.47□□□□□ -0.57
NEDD9-211ENST00000508546 RPAP3Q9H6T3 665 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-211ENST00000508546 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 FPGT-TNNI3KV9GXZ4 949 aa11.47□□□□□ -0.57
NEDD9-211ENST00000508546 CYP7A1P22680 504 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 ZAP70P43403 619 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 USP5P45974 858 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 COG2Q14746 738 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 LRRC41Q15345 812 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 TMED8Q6PL24 325 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-211ENST00000508546 ABRAQ8N0Z2 381 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 SPATC1LQ9H0A9 340 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 PIH1D3Q9NQM4 214 aaKnown RBP11.46□□□□□ -0.57
NEDD9-211ENST00000508546 SLC5A4Q9NY91 659 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 CXXC1Q9P0U4 656 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-211ENST00000508546 TACC3Q9Y6A5 838 aa11.46□□□□□ -0.57
NEDD9-211ENST00000508546 COBLO75128 1261 aa11.45□□□□□ -0.58
NEDD9-211ENST00000508546 GUCY1A2P33402 732 aa11.45□□□□□ -0.58
NEDD9-211ENST00000508546 SHMT1P34896 483 aa11.45□□□□□ -0.58
NEDD9-211ENST00000508546 PBX2P40425 430 aa11.45□□□□□ -0.58
NEDD9-211ENST00000508546 ADCYAP1R1P41586 468 aa11.45□□□□□ -0.58
NEDD9-211ENST00000508546 ANO1Q5XXA6 986 aa11.45□□□□□ -0.58
NEDD9-211ENST00000508546 MB21D1Q8N884 522 aa11.45□□□□□ -0.58
NEDD9-211ENST00000508546 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-211ENST00000508546 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-211ENST00000508546 KIAA0355O15063 1070 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 ERCC3P19447 782 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 TLE2Q04725 743 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 GABPAQ06546 454 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 POLA2Q14181 598 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 FAM47AQ5JRC9 791 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 PBX4Q9BYU1 374 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 MROH8Q9H579 483 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 NRBP1Q9UHY1 535 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 PHF24Q9UPV7 400 aa11.44□□□□□ -0.58
NEDD9-211ENST00000508546 ROBO3Q96MS0 1386 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 A0A1W2PRG0 241 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 GRXCR1A8MXD5 290 aa11.43□□□□□ -0.58
NEDD9-211ENST00000508546 IPO8O15397 1037 aaKnown RBP11.43□□□□□ -0.58
NEDD9-211ENST00000508546 GPR37L1O60883 481 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms