RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MEIS3P2A8K0S8 358 aa9.06□□□□□ -0.96
TOPBP1-206ENST00000508524 BIN1O00499 593 aa9.06□□□□□ -0.96
TOPBP1-206ENST00000508524 POLR2BP30876 1174 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-206ENST00000508524 GBP1P32455 592 aa9.06□□□□□ -0.96
TOPBP1-206ENST00000508524 C19orf73Q9NVV2 129 aa9.06□□□□□ -0.96
TOPBP1-206ENST00000508524 CTNND2Q9UQB3 1225 aa9.06□□□□□ -0.96
TOPBP1-206ENST00000508524 TPP2P29144 1249 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-206ENST00000508524 NLRC3Q7RTR2 1065 aa9.05□□□□□ -0.96
TOPBP1-206ENST00000508524 TMEM40Q8WWA1 233 aa9.05□□□□□ -0.96
TOPBP1-206ENST00000508524 TRIT1Q9H3H1 467 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-206ENST00000508524 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
TOPBP1-206ENST00000508524 TSPYL5Q86VY4 417 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-206ENST00000508524 GPATCH2Q9NW75 528 aa9.04□□□□□ -0.96
TOPBP1-206ENST00000508524 ZNRF3Q9ULT6 936 aa9.04□□□□□ -0.96
TOPBP1-206ENST00000508524 KRTAP9-6A0A140TA67 174 aa9.03□□□□□ -0.96
TOPBP1-206ENST00000508524 SHISA3A0PJX4 238 aa9.03□□□□□ -0.96
TOPBP1-206ENST00000508524 CREG2Q8IUH2 290 aa9.03□□□□□ -0.96
TOPBP1-206ENST00000508524 ALPK1Q96QP1 1244 aa9.03□□□□□ -0.96
TOPBP1-206ENST00000508524 KRTAP4-12Q9BQ66 201 aa9.03□□□□□ -0.96
TOPBP1-206ENST00000508524 NME1P15531 152 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-206ENST00000508524 HDLBPQ00341 1268 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-206ENST00000508524 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-206ENST00000508524 FAM168AQ92567 244 aa9.02□□□□□ -0.97
TOPBP1-206ENST00000508524 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.02□□□□□ -0.97
TOPBP1-206ENST00000508524 DUSP13Q9UII6 198 aa9.02□□□□□ -0.97
TOPBP1-206ENST00000508524 TNFRSF10CO14798 259 aa9.01□□□□□ -0.97
TOPBP1-206ENST00000508524 NBPF12Q5TAG4 269 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-206ENST00000508524 ZNF654Q8IZM8 581 aa9.01□□□□□ -0.97
TOPBP1-206ENST00000508524 SLAMF8Q9P0V8 285 aa9.01□□□□□ -0.97
TOPBP1-206ENST00000508524 DNAJC25-GNG10A0A024R161 153 aa9□□□□□ -0.97
TOPBP1-206ENST00000508524 GDNFP39905 211 aa9□□□□□ -0.97
TOPBP1-206ENST00000508524 CCNFP41002 786 aa9□□□□□ -0.97
TOPBP1-206ENST00000508524 TXKP42681 527 aa9□□□□□ -0.97
TOPBP1-206ENST00000508524 RNF4P78317 190 aa9□□□□□ -0.97
TOPBP1-206ENST00000508524 RALGPS1Q5JS13 557 aa9□□□□□ -0.97
TOPBP1-206ENST00000508524 FYB2Q5VWT5 728 aa9□□□□□ -0.97
TOPBP1-206ENST00000508524 CHMP4BP1P59074 171 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 RAD51AP2Q09MP3 1159 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 PAK2Q13177 524 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 OGFOD2Q6N063 350 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 NT5DC4Q86YG4 428 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 TMEM192Q8IY95 271 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 SLC9A7Q96T83 725 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 PCDHA11Q9Y5I1 949 aa8.99□□□□□ -0.97
TOPBP1-206ENST00000508524 ACRP10323 421 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 IMPDH2P12268 514 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 EGR3Q06889 387 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 NBPF9Q3BBW0 867 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 C9orf131Q5VYM1 1079 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 ZSWIM9Q86XI8 627 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 ZNF512BQ96KM6 892 aaPredicted RBP8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 TMEM59LQ9UK28 342 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 PPT2Q9UMR5 302 aa8.98□□□□□ -0.97
TOPBP1-206ENST00000508524 CLEC3AO75596 197 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 LTKP29376 864 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 AFMP43652 599 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 NMIQ13287 307 aaPredicted RBP8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 SNW1Q13573 536 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 CCDC120Q96HB5 630 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 SLC6A18Q96N87 628 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 FERD3LQ96RJ6 166 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 HDAC8Q9BY41 377 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 ADAMTS10Q9H324 1103 aa8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-206ENST00000508524 INTS3Q68E01 1043 aaKnown RBP8.96□□□□□ -0.98
TOPBP1-206ENST00000508524 TMC3Q7Z5M5 1100 aa8.96□□□□□ -0.98
TOPBP1-206ENST00000508524 TTC6Q86TZ1 520 aa8.96□□□□□ -0.98
TOPBP1-206ENST00000508524 SYTL5Q8TDW5 730 aaPredicted RBP8.96□□□□□ -0.98
TOPBP1-206ENST00000508524 GINM1Q9NU53 330 aa8.96□□□□□ -0.98
TOPBP1-206ENST00000508524 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 KCNMB1Q16558 191 aa8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 CLEC16AQ2KHT3 1053 aa8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 TAB3Q8N5C8 712 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 RBBP8NLQ8NC74 664 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 ENOX1Q8TC92 643 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 RASGRP4Q8TDF6 673 aa8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 KIRREL1Q96J84 757 aa8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 GOLGA2P5Q9HBQ8 144 aa8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-206ENST00000508524 ZNF503-AS2A6NEH8 195 aa8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 ZGLP1P0C6A0 271 aa8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 HK2P52789 917 aa8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 TEKQ02763 1124 aa8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 COL9A2Q14055 689 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 POU5F2Q8N7G0 328 aa8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 GPRASP2Q96D09 838 aa8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 PRDM14Q9GZV8 571 aa8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 ASCC2Q9H1I8 757 aaPredicted RBP8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.94□□□□□ -0.98
TOPBP1-206ENST00000508524 FAM86C2PA6NEL3 165 aa8.93□□□□□ -0.98
TOPBP1-206ENST00000508524 GJA8P48165 433 aa8.93□□□□□ -0.98
TOPBP1-206ENST00000508524 SOX9P48436 509 aa8.93□□□□□ -0.98
TOPBP1-206ENST00000508524 ERVFC1P60507 584 aa8.93□□□□□ -0.98
TOPBP1-206ENST00000508524 DAGLBQ8NCG7 672 aa8.93□□□□□ -0.98
TOPBP1-206ENST00000508524 TM9SF2Q99805 663 aa8.93□□□□□ -0.98
TOPBP1-206ENST00000508524 SP110Q9HB58 689 aa8.93□□□□□ -0.98
TOPBP1-206ENST00000508524 HPXP02790 462 aa8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 GLI1P08151 1106 aa8.92□□□□□ -0.98
TOPBP1-206ENST00000508524 FBXW10Q5XX13 1052 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms