RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NKIRAS2Q9NYR9 191 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 STIM2Q9P246 746 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 NFKBIL1Q9UBC1 381 aaPredicted RBP8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.03
PDGFRA-206ENST00000508170 A0A087WZG4 1122 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 DDX3YO15523 660 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 FOXO3O43524 673 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 GJB6O95452 261 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 CPP00450 1065 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 ATP6V1E1P36543 226 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 STAT4Q14765 748 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 SYDE2Q5VT97 1194 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 RNF219Q5W0B1 726 aaPredicted RBP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 DZIP1LQ8IYY4 767 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 STON2Q8WXE9 905 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 HAUS7Q99871 368 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 ELAC1Q9H777 363 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 RCAN3Q9UKA8 241 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 FAM221AA4D161 298 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 BAG2O95816 211 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 NEFHP12036 1026 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 KRT10P13645 584 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 MAN2A2P49641 1150 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 PAPOLAP51003 745 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 CEP57L1Q8IYX8 460 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 MNS1Q8NEH6 495 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 SLC12A5Q9H2X9 1139 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 CHCHD3Q9NX63 227 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 SAP30BPQ9UHR5 308 aaKnown RBP8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 FBXL5Q9UKA1 691 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 BLOC1S6Q9UL45 172 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 ITM2BQ9Y287 266 aa8.64□□□□□ -1.03
PDGFRA-206ENST00000508170 SKAP2O75563 359 aaPredicted RBP8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 GCGRP47871 477 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 CCDC15Q0P6D6 951 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 MRPL28Q13084 256 aaKnown RBP8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 CCNG2Q16589 344 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 HECTD3Q5T447 861 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 SLC6A19Q695T7 634 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 CNNM4Q6P4Q7 775 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 LEO1Q8WVC0 666 aaPredicted RBP8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 TOPORSQ9NS56 1045 aaPredicted RBP8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 TRMT13Q9NUP7 481 aaKnown RBP8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 UBP1Q9NZI7 540 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 GJD2Q9UKL4 321 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 SOGA1O94964 1423 aa8.63□□□□□ -1.03
PDGFRA-206ENST00000508170 FAM153BP0C7A2 387 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 PF4V1P10720 104 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 PRKAR2AP13861 404 aaKnown RBP8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 COL9A1P20849 921 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 PRPHP41219 470 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 LRRTM3Q86VH5 581 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 MSANTD4Q8NCY6 345 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 SLC7A3Q8WY07 619 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 DDX11Q96FC9 970 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 TNKS2Q9H2K2 1166 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 RPAP3Q9H6T3 665 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 FAM8A1Q9UBU6 413 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 TNIKQ9UKE5 1360 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 AREL1O15033 823 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 IGFBP4P22692 258 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 GRK6P43250 576 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 PDE6CP51160 858 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 TPD52P55327 224 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 MOGSQ13724 837 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 PTPN21Q16825 1174 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 FAM26DQ5JW98 314 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 ITPRIPL1Q6GPH6 555 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 BRINP3Q76B58 766 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 SDCCAG8Q86SQ7 713 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 ELOA2Q8IYF1 753 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 BHMTQ93088 406 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 LRGUKQ96M69 825 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 GSDMAQ96QA5 445 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 NT5C1AQ9BXI3 368 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 PUS7LQ9H0K6 701 aaKnown RBP8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 RSAD1Q9HA92 442 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 CRYL1Q9Y2S2 319 aa8.62□□□□□ -1.03
PDGFRA-206ENST00000508170 ATAD2BQ9ULI0 1458 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 DNAJC25-GNG10A0A024R161 153 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 POTEFA5A3E0 1075 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 CTAGE5O15320 804 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 RFPL3O75679 317 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 ZKSCAN1P17029 563 aaPredicted RBP8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 INF2Q27J81 1249 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 FBXL19Q6PCT2 694 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 C4orf50Q6ZRC1 276 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 NAT8LQ8N9F0 302 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 HDAC2Q92769 488 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 MOGAT1Q96PD6 335 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 TMEM106CQ9BVX2 250 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 SLC26A6Q9BXS9 759 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 LMAN2LQ9H0V9 348 aa8.61□□□□□ -1.03
PDGFRA-206ENST00000508170 CEP162Q5TB80 1403 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms