RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 MTMR7Q9Y216 660 aa18.81■□□□□ 0.6
SPSB4-203ENST00000508126 PARP1P09874 1014 aaKnown RBP18.81■□□□□ 0.6
SPSB4-203ENST00000508126 GUCY1A2P33402 732 aa18.81■□□□□ 0.6
SPSB4-203ENST00000508126 LRRC47Q8N1G4 583 aaKnown RBP18.81■□□□□ 0.6
SPSB4-203ENST00000508126 TMEM87AQ8NBN3 555 aa18.81■□□□□ 0.6
SPSB4-203ENST00000508126 CABP5Q9NP86 173 aa18.81■□□□□ 0.6
SPSB4-203ENST00000508126 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
SPSB4-203ENST00000508126 V9GY48 417 aaPredicted RBP18.81■□□□□ 0.6
SPSB4-203ENST00000508126 FIBPO43427 364 aa18.8■□□□□ 0.6
SPSB4-203ENST00000508126 BRAPQ7Z569 592 aa18.8■□□□□ 0.6
SPSB4-203ENST00000508126 CLEC10AQ8IUN9 316 aa18.8■□□□□ 0.6
SPSB4-203ENST00000508126 GJB4Q9NTQ9 266 aa18.8■□□□□ 0.6
SPSB4-203ENST00000508126 PALM3A6NDB9 673 aaPredicted RBP18.79■□□□□ 0.6
SPSB4-203ENST00000508126 UBE2Q2LH0YL09 131 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 TBC1D12O60347 775 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 GDF11O95390 407 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 GNL2Q13823 731 aaKnown RBP18.79■□□□□ 0.6
SPSB4-203ENST00000508126 RASA3Q14644 834 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 SAFBQ15424 915 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPSB4-203ENST00000508126 FAM173BQ6P4H8 233 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 GDPD2Q9HCC8 539 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 NYAP2Q9P242 653 aa18.79■□□□□ 0.6
SPSB4-203ENST00000508126 KIF23Q02241 960 aaPredicted RBP18.78■□□□□ 0.6
SPSB4-203ENST00000508126 ICA1Q05084 483 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 ATL3Q6DD88 541 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 USP48Q86UV5 1035 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 SCAND2PQ9GZW5 306 aaPredicted RBP18.78■□□□□ 0.6
SPSB4-203ENST00000508126 HACL1Q9UJ83 578 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 MYH6P13533 1939 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 KLRF2D3W0D1 207 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 PDHBP11177 359 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 SEPT2Q15019 361 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 PKN1Q16512 942 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 ASPRV1Q53RT3 343 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 ZNF396Q96N95 335 aaPredicted RBP18.78■□□□□ 0.6
SPSB4-203ENST00000508126 CFAP45Q9UL16 551 aa18.78■□□□□ 0.6
SPSB4-203ENST00000508126 DDX49Q9Y6V7 483 aaKnown RBP18.78■□□□□ 0.6
SPSB4-203ENST00000508126 GH2P01242 217 aa18.77■□□□□ 0.6
SPSB4-203ENST00000508126 MMP1P03956 469 aa18.77■□□□□ 0.6
SPSB4-203ENST00000508126 LMOD1P29536 600 aaPredicted RBP18.77■□□□□ 0.6
SPSB4-203ENST00000508126 USP17L2Q6R6M4 530 aa18.77■□□□□ 0.6
SPSB4-203ENST00000508126 APOBEC3FQ8IUX4 373 aaKnown RBP18.77■□□□□ 0.6
SPSB4-203ENST00000508126 SPZ1Q9BXG8 430 aa18.77■□□□□ 0.6
SPSB4-203ENST00000508126 PGAP2Q9UHJ9 254 aa18.77■□□□□ 0.6
SPSB4-203ENST00000508126 TCHHQ07283 1943 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 hCG_1642624A0A1W2PR95 340 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 USP17L5A8MUK1 530 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 MBD3O95983 291 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 SNHG28P0DPA3 235 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 SCG2P13521 617 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 EEF2P13639 858 aaKnown RBP18.76■□□□□ 0.59
SPSB4-203ENST00000508126 SMARCA1P28370 1054 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 KLHL40Q2TBA0 621 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 CDAN1Q8IWY9 1227 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 MKL1Q969V6 931 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 GOLGA8HP0CJ92 632 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 GPR162Q16538 588 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 PFKFB3Q16875 520 aaPredicted RBP18.76■□□□□ 0.59
SPSB4-203ENST00000508126 SHROOM1Q2M3G4 852 aaPredicted RBP18.76■□□□□ 0.59
SPSB4-203ENST00000508126 RASGRP2Q7LDG7 609 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 TRPM4Q8TD43 1214 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 SPATA32Q96LK8 384 aa18.76■□□□□ 0.59
SPSB4-203ENST00000508126 ASTN2O75129 1339 aaPredicted RBP18.75■□□□□ 0.59
SPSB4-203ENST00000508126 MYH4Q9Y623 1939 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 MAP3K10Q02779 954 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 GPATCH4Q5T3I0 446 aaKnown RBP18.75■□□□□ 0.59
SPSB4-203ENST00000508126 MIGA2Q7L4E1 593 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 DEFB129Q9H1M3 183 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 VPS54Q9P1Q0 977 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 TFIP11Q9UBB9 837 aaKnown RBP18.75■□□□□ 0.59
SPSB4-203ENST00000508126 SYNPO2Q9UMS6 1093 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 ELP1O95163 1332 aa18.75■□□□□ 0.59
SPSB4-203ENST00000508126 DDNO94850 711 aaPredicted RBP18.74■□□□□ 0.59
SPSB4-203ENST00000508126 U2AF2P26368 475 aaKnown RBP eCLIP18.74■□□□□ 0.59
SPSB4-203ENST00000508126 EPS15P42566 896 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 ZNF543Q08ER8 600 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
SPSB4-203ENST00000508126 ANGEL2Q5VTE6 544 aaKnown RBP18.74■□□□□ 0.59
SPSB4-203ENST00000508126 MYSM1Q5VVJ2 828 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 DIS3L2Q8IYB7 885 aaKnown RBP18.74■□□□□ 0.59
SPSB4-203ENST00000508126 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 TEPSINQ96N21 525 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 BRMS1Q9HCU9 246 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 KCNJ14Q9UNX9 436 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 MYH15Q9Y2K3 1946 aa18.74■□□□□ 0.59
SPSB4-203ENST00000508126 UBE2HP62256 183 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 HOOK2Q96ED9 719 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 FOXP1Q9H334 677 aaPredicted RBP18.73■□□□□ 0.59
SPSB4-203ENST00000508126 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 FRMPD2Q68DX3 1309 aaPredicted RBP18.73■□□□□ 0.59
SPSB4-203ENST00000508126 CYTH3O43739 400 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 GRIN3BO60391 1043 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 DCAF4Q8WV16 495 aa18.73■□□□□ 0.59
SPSB4-203ENST00000508126 LEO1Q8WVC0 666 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms