RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 SBK1Q52WX2 424 aa19.35■□□□□ 0.69
HOXC4-203ENST00000507650 GTF3C2Q8WUA4 911 aaPredicted RBP19.35■□□□□ 0.69
HOXC4-203ENST00000507650 TMX2Q9Y320 296 aa19.35■□□□□ 0.69
HOXC4-203ENST00000507650 MAPK4P31152 587 aa19.34■□□□□ 0.69
HOXC4-203ENST00000507650 ICA1Q05084 483 aa19.34■□□□□ 0.69
HOXC4-203ENST00000507650 PLEKHH3Q7Z736 793 aa19.34■□□□□ 0.69
HOXC4-203ENST00000507650 SPICE1Q8N0Z3 855 aa19.34■□□□□ 0.69
HOXC4-203ENST00000507650 NKX2-3Q8TAU0 364 aa19.34■□□□□ 0.69
HOXC4-203ENST00000507650 DIS3LQ8TF46 1054 aaKnown RBP19.34■□□□□ 0.69
HOXC4-203ENST00000507650 GPATCH3Q96I76 525 aa19.34■□□□□ 0.69
HOXC4-203ENST00000507650 FLRT1Q9NZU1 646 aa19.34■□□□□ 0.69
HOXC4-203ENST00000507650 H0YGN5 161 aa19.33■□□□□ 0.68
HOXC4-203ENST00000507650 FARP2O94887 1054 aaPredicted RBP19.33■□□□□ 0.68
HOXC4-203ENST00000507650 XRCC5P13010 732 aaKnown RBP19.33■□□□□ 0.68
HOXC4-203ENST00000507650 MX1P20591 662 aa19.33■□□□□ 0.68
HOXC4-203ENST00000507650 RASA1P20936 1047 aa19.33■□□□□ 0.68
HOXC4-203ENST00000507650 STK11IPQ8N1F8 1099 aa19.33■□□□□ 0.68
HOXC4-203ENST00000507650 SOCS4Q8WXH5 440 aa19.33■□□□□ 0.68
HOXC4-203ENST00000507650 NUDT12Q9BQG2 462 aa19.33■□□□□ 0.68
HOXC4-203ENST00000507650 ARPP21Q9UBL0 812 aaPredicted RBP19.33■□□□□ 0.68
HOXC4-203ENST00000507650 TRIOBPQ9H2D6 2365 aa19.33■□□□□ 0.68
HOXC4-203ENST00000507650 IGHA2P01877 340 aa19.32■□□□□ 0.68
HOXC4-203ENST00000507650 EEF2P13639 858 aaKnown RBP19.32■□□□□ 0.68
HOXC4-203ENST00000507650 HDAC1Q13547 482 aaPredicted RBP19.32■□□□□ 0.68
HOXC4-203ENST00000507650 CCDC17Q96LX7 622 aa19.32■□□□□ 0.68
HOXC4-203ENST00000507650 VCPKMTQ9H867 229 aa19.32■□□□□ 0.68
HOXC4-203ENST00000507650 GLRX3O76003 335 aaKnown RBP19.31■□□□□ 0.68
HOXC4-203ENST00000507650 PRKAR2AP13861 404 aaKnown RBP19.31■□□□□ 0.68
HOXC4-203ENST00000507650 ZMYM1Q5SVZ6 1142 aa19.31■□□□□ 0.68
HOXC4-203ENST00000507650 GIMAP6Q6P9H5 292 aa19.31■□□□□ 0.68
HOXC4-203ENST00000507650 TANGO6Q9C0B7 1094 aa19.31■□□□□ 0.68
HOXC4-203ENST00000507650 RPTORQ8N122 1335 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 DNAH12Q6ZR08 3092 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 ZFYP08048 801 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-203ENST00000507650 PTPREP23469 700 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 CACNB2Q08289 660 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-203ENST00000507650 MAP2K5Q13163 448 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 GRB14Q14449 540 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 COG2Q14746 738 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 NPLOC4Q8TAT6 608 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 ATG4CQ96DT6 458 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 APBA2Q99767 749 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 MOV10L1Q9BXT6 1211 aaKnown RBP19.3■□□□□ 0.68
HOXC4-203ENST00000507650 ARHGEF10LQ9HCE6 1279 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 FBXO28Q9NVF7 368 aa19.3■□□□□ 0.68
HOXC4-203ENST00000507650 SZT2Q5T011 3432 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 IGKV6D-41A0A0C4DH26 115 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 MINDY4BA8MYZ0 360 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 TFRCP02786 760 aaKnown RBP19.29■□□□□ 0.68
HOXC4-203ENST00000507650 CCND3P30281 292 aaPredicted RBP19.29■□□□□ 0.68
HOXC4-203ENST00000507650 DSG3P32926 999 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 RGS2P41220 211 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 CCDC129Q6ZRS4 1044 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 LPAR1Q92633 364 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 FSD1Q9BTV5 496 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 STAP2Q9UGK3 403 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 TACC3Q9Y6A5 838 aa19.29■□□□□ 0.68
HOXC4-203ENST00000507650 ERC2O15083 957 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 PRDM1O75626 825 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 ZKSCAN1P17029 563 aaPredicted RBP19.28■□□□□ 0.68
HOXC4-203ENST00000507650 HABP4Q5JVS0 413 aaKnown RBP19.28■□□□□ 0.68
HOXC4-203ENST00000507650 AMOTL1Q8IY63 956 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 IFNL3Q8IZI9 196 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 DDRGK1Q96HY6 314 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 PAWRQ96IZ0 340 aaKnown RBP19.28■□□□□ 0.68
HOXC4-203ENST00000507650 SPATC1LQ9H0A9 340 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 KANSL2Q9H9L4 492 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 HMX1Q9NP08 348 aaPredicted RBP19.28■□□□□ 0.68
HOXC4-203ENST00000507650 ADAMTS5Q9UNA0 930 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 COLQQ9Y215 455 aaPredicted RBP19.28■□□□□ 0.68
HOXC4-203ENST00000507650 SMCHD1A6NHR9 2005 aa19.28■□□□□ 0.68
HOXC4-203ENST00000507650 SLC15A5A6NIM6 579 aa19.27■□□□□ 0.68
HOXC4-203ENST00000507650 WDR46O15213 610 aaKnown RBP19.27■□□□□ 0.68
HOXC4-203ENST00000507650 FLOT1O75955 427 aa19.27■□□□□ 0.68
HOXC4-203ENST00000507650 PDE1AP54750 535 aa19.27■□□□□ 0.68
HOXC4-203ENST00000507650 CCNA1P78396 465 aa19.27■□□□□ 0.68
HOXC4-203ENST00000507650 LHX8Q68G74 356 aa19.27■□□□□ 0.68
HOXC4-203ENST00000507650 NUP88Q99567 741 aaPredicted RBP19.27■□□□□ 0.68
HOXC4-203ENST00000507650 OGDHLQ9ULD0 1010 aa19.27■□□□□ 0.68
HOXC4-203ENST00000507650 MCM3APO60318 1980 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 PATL2C9JE40 543 aaKnown RBP19.26■□□□□ 0.67
HOXC4-203ENST00000507650 IGHDP01880 384 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 HOXC6P09630 235 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 ERCC3P19447 782 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 ATP2B2Q01814 1243 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 TMEM132BQ14DG7 1078 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 VPS53Q5VIR6 699 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 WDR78Q5VTH9 848 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 TRPV1Q8NER1 839 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 REPS2Q8NFH8 660 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 EXOC6Q8TAG9 804 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 GCC1Q96CN9 775 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 HOXC10Q9NYD6 342 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 PLIN4Q96Q06 1357 aa19.26■□□□□ 0.67
HOXC4-203ENST00000507650 LAMA4Q16363 1823 aa19.25■□□□□ 0.67
HOXC4-203ENST00000507650 LAMA3Q16787 3333 aa19.25■□□□□ 0.67
HOXC4-203ENST00000507650 COBLO75128 1261 aa19.25■□□□□ 0.67
HOXC4-203ENST00000507650 GNAT2P19087 354 aa19.25■□□□□ 0.67
HOXC4-203ENST00000507650 TDO2P48775 406 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms