RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PIDD1Q9HB75 910 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 SSU72Q9NP77 194 aaKnown RBP4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 PLAAQ9Y263 795 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 CC2D2AQ9P2K1 1620 aa4.53□□□□□ -1.68
TRAPPC11-205ENST00000506426 SPDYE3A6NKU9 549 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 PIK3R2O00459 728 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 ADCY3O60266 1144 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 RAB11FIP3O75154 756 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 UBOX5O94941 541 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 CST3P01034 146 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 TP53P04637 393 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 SPATA31C1P0DKV0 1188 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 NTF4P34130 210 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 CAP2P40123 477 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 ASPAP45381 313 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 SLBPQ14493 270 aaKnown RBP eCLIP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 GRIK4Q16099 956 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 DALRD3Q5D0E6 543 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 HEATR6Q6AI08 1181 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 IGF2-ASQ6U949 168 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 KIAA1211Q6ZU35 1233 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 TMEM192Q8IY95 271 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 BAHD1Q8TBE0 780 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 CYB5D2Q8WUJ1 264 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 MRPL18Q9H0U6 180 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 FBRSQ9HAH7 460 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 METTL14Q9HCE5 456 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 LRP2BPQ9P2M1 347 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 CD2APQ9Y5K6 639 aa4.52□□□□□ -1.69
TRAPPC11-205ENST00000506426 WISP1O95388 367 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 NEFMP07197 916 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 HCLS1P14317 486 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 TRIM28Q13263 835 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 HSP90AA2PQ14568 343 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 NKG7Q16617 165 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 PRAMEF13Q5VWM6 474 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 FDX2Q6P4F2 183 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 NBPF11Q86T75 865 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 CCDC144CPQ8IYA2 1237 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 SMYD4Q8IYR2 804 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 MFSD2AQ8NA29 543 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 ISL2Q96A47 359 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 CDC6Q99741 560 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 DPH2Q9BQC3 489 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 FOXQ1Q9C009 403 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 GSX1Q9H4S2 264 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 FAM86C1Q9NVL1 165 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 PCOLCE2Q9UKZ9 415 aa4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 EIF4G1Q04637 1599 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-205ENST00000506426 TRAV20A0A0B4J274 112 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 A0A1W2PQU0 124 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 LRIG2O94898 1065 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 EPHX1P07099 455 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 DRD2P14416 443 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 AMPD3Q01432 767 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 C21orf62-AS1Q17RA5 79 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 TDRD10Q5VZ19 366 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 ANKRD34AQ69YU3 496 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 ADAT2Q7Z6V5 191 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 PPFIBP1Q86W92 1011 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 SCUBE1Q8IWY4 988 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 LRRN4CLQ8ND94 238 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 NINJ1Q92982 152 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 PPP1R14AQ96A00 147 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 MFSD3Q96ES6 412 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 HAUS7Q99871 368 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 DHRS4Q9BTZ2 278 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 GBP3Q9H0R5 595 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 SUSD2Q9UGT4 822 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 DCAF1Q9Y4B6 1507 aa4.5□□□□□ -1.69
TRAPPC11-205ENST00000506426 TRBV23-1A0A0A0MS06 115 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 BTBD11A6QL63 1104 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 C9IYK1 514 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 NOP56O00567 594 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 PLD2O14939 933 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 HYAL3O43820 417 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 RFPL3O75679 317 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 PPM1BO75688 479 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 TIAF1O95411 115 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 VIL1P09327 827 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 ELNP15502 786 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 L1CAMP32004 1257 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 RNF4P78317 190 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 TM4SF20Q53R12 229 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 ANKRD39Q53RE8 183 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 AXDND1Q5T1B0 1012 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 FOXB2Q5VYV0 432 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 KRT26Q7Z3Y9 468 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 DHX37Q8IY37 1157 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 NIM1KQ8IY84 436 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 TMEM130Q8N3G9 435 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 XAGE3Q8WTP9 111 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 KISS1RQ969F8 398 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 AARSD1Q9BTE6 412 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 MKRN2Q9H000 416 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 KLHL25Q9H0H3 589 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 CEP131Q9UPN4 1083 aa4.49□□□□□ -1.69
TRAPPC11-205ENST00000506426 SUGT1Q9Y2Z0 365 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms