RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 PRPF40AO75400 957 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 PLEKHA8P1O95397 391 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 ATP2B2Q01814 1243 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 GUCY1B3Q02153 619 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 ICA1Q05084 483 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 RASA3Q14644 834 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 FOXD4L6Q3SYB3 417 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 TBC1D10BQ4KMP7 808 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 GPATCH4Q5T3I0 446 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 DCAF15Q66K64 600 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 KRT40Q6A162 431 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 FOXD4L3Q6VB84 417 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 MKL1Q969V6 931 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 SPZ1Q9BXG8 430 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 SH2D4AQ9H788 454 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 DNAJC18Q9H819 358 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 PPP2R3BQ9Y5P8 575 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 TCHHQ07283 1943 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.19
POLR2J3-211ENST00000506060 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 CALML3P27482 149 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 DNM1Q05193 864 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 FUT2Q10981 343 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 C9orf131Q5VYM1 1079 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 SAMD7Q7Z3H4 446 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 SRBD1Q8N5C6 995 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 CCDC12Q8WUD4 166 aaPredicted RBP13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 TMEM39BQ9GZU3 492 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 SH3GLB2Q9NR46 395 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 SEC63Q9UGP8 760 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 HACL1Q9UJ83 578 aa13.89□□□□□ -0.19
POLR2J3-211ENST00000506060 GOLGA6L4A6NEF3 574 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 FIBPO43427 364 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 MMP1P03956 469 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 SCG2P13521 617 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 YBX3P16989 372 aaKnown RBP eCLIP13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 MAP3K10Q02779 954 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 RRP36Q96EU6 259 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 SPATA32Q96LK8 384 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 FOXP1Q9H334 677 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 LMBRD1Q9NUN5 540 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 CNPY2Q9Y2B0 182 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 ELP1O95163 1332 aa13.88□□□□□ -0.19
POLR2J3-211ENST00000506060 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 FAM196BA6NMK8 535 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 GH2P01242 217 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 ASNSP08243 561 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 PDHBP11177 359 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 EEF2P13639 858 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 UBE2HP62256 183 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 KIF23Q02241 960 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 SEPT2Q15019 361 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 PFKFB3Q16875 520 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 CCDC96Q2M329 555 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 GALNT17Q6IS24 598 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 CMTR1Q8N1G2 835 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 DEFB129Q9H1M3 183 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 ADARB2Q9NS39 739 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 PITPNM2Q9BZ72 1349 aa13.87□□□□□ -0.19
POLR2J3-211ENST00000506060 MYH15Q9Y2K3 1946 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 GDF11O95390 407 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 U2AF2P26368 475 aaKnown RBP eCLIP13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 KRT2P35908 639 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 CAP2P40123 477 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 PKN1Q16512 942 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 OTUD7BQ6GQQ9 843 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 USP17L2Q6R6M4 530 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 STAG2Q8N3U4 1231 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 GMCL1P1Q8NEA9 526 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 AIFM3Q96NN9 605 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 ZBTB21Q9ULJ3 1066 aa13.86□□□□□ -0.19
POLR2J3-211ENST00000506060 USP17L5A8MUK1 530 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 GUCY1A2P33402 732 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 SLC1A4P43007 532 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 NLRP5P59047 1200 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 SUPT20HL1Q3ZLR7 823 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 ANGEL2Q5VTE6 544 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 MYSM1Q5VVJ2 828 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 SLFN13Q68D06 897 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 NOSTRINQ8IVI9 506 aa13.85□□□□□ -0.19
POLR2J3-211ENST00000506060 DIS3L2Q8IYB7 885 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms