RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 CCDC120Q96HB5 630 aa7.01□□□□□ -1.29
LINC00616-202ENST00000505874 ASPNQ9BXN1 380 aa7.01□□□□□ -1.29
LINC00616-202ENST00000505874 GMIPQ9P107 970 aa7.01□□□□□ -1.29
LINC00616-202ENST00000505874 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
LINC00616-202ENST00000505874 RGS13O14921 159 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 FARP2O94887 1054 aaPredicted RBP7□□□□□ -1.29
LINC00616-202ENST00000505874 POLR2BP30876 1174 aaKnown RBP7□□□□□ -1.29
LINC00616-202ENST00000505874 CLCQ05315 142 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 EGR3Q06889 387 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 MLANAQ16655 118 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 TMEM67Q5HYA8 995 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 OVOS1Q6IE37 1185 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 GK5Q6ZS86 529 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 ADAMTS10Q9H324 1103 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 TMEM59LQ9UK28 342 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 PCDHA11Q9Y5I1 949 aa7□□□□□ -1.29
LINC00616-202ENST00000505874 SHISA3A0PJX4 238 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 UBOX5O94941 541 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 ATE1O95260 518 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 GLI1P08151 1106 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 RAC2P15153 192 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 ERVFC1P60507 584 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 ZNF124Q15973 351 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 MPZL3Q6UWV2 235 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 BACH2Q9BYV9 841 aa6.99□□□□□ -1.29
LINC00616-202ENST00000505874 ZNF76P36508 570 aa6.98□□□□□ -1.29
LINC00616-202ENST00000505874 CLEC16AQ2KHT3 1053 aa6.98□□□□□ -1.29
LINC00616-202ENST00000505874 KSR1Q8IVT5 923 aa6.98□□□□□ -1.29
LINC00616-202ENST00000505874 NKD1Q969G9 470 aa6.98□□□□□ -1.29
LINC00616-202ENST00000505874 SPON2Q9BUD6 331 aa6.98□□□□□ -1.29
LINC00616-202ENST00000505874 EHMT1Q9H9B1 1298 aa6.98□□□□□ -1.29
LINC00616-202ENST00000505874 ZNF165P49910 485 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 KIAA0825Q8IV33 1275 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 ABHD4Q8TB40 342 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 VWCEQ96DN2 955 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 ATG4CQ96DT6 458 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 EAF1Q96JC9 268 aaPredicted RBP6.97□□□□□ -1.29
LINC00616-202ENST00000505874 ANTXR1Q9H6X2 564 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 FAM53CQ9NYF3 392 aa6.97□□□□□ -1.29
LINC00616-202ENST00000505874 TRHRP34981 398 aaPredicted RBP6.96□□□□□ -1.3
LINC00616-202ENST00000505874 RNF4P78317 190 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 ZNF394Q53GI3 561 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 CDCP2Q5VXM1 449 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 PRR23BQ6ZRT6 265 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 USP48Q86UV5 1035 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 MYLIPQ8WY64 445 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 ZNF512BQ96KM6 892 aaPredicted RBP6.96□□□□□ -1.3
LINC00616-202ENST00000505874 NT5C1AQ9BXI3 368 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 ASCC2Q9H1I8 757 aaPredicted RBP6.96□□□□□ -1.3
LINC00616-202ENST00000505874 CNNM2Q9H8M5 875 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 PCDHGB7Q9Y5F8 929 aa6.96□□□□□ -1.3
LINC00616-202ENST00000505874 RBM47A0AV96 593 aaKnown RBP6.95□□□□□ -1.3
LINC00616-202ENST00000505874 FANCCQ00597 558 aa6.95□□□□□ -1.3
LINC00616-202ENST00000505874 MESP2Q0VG99 397 aa6.95□□□□□ -1.3
LINC00616-202ENST00000505874 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
LINC00616-202ENST00000505874 PKN1Q16512 942 aa6.95□□□□□ -1.3
LINC00616-202ENST00000505874 NBPF12Q5TAG4 269 aaPredicted RBP6.95□□□□□ -1.3
LINC00616-202ENST00000505874 NLRC3Q7RTR2 1065 aa6.95□□□□□ -1.3
LINC00616-202ENST00000505874 SLITRK4Q8IW52 837 aa6.95□□□□□ -1.3
LINC00616-202ENST00000505874 REXO1Q8N1G1 1221 aaKnown RBP6.95□□□□□ -1.3
LINC00616-202ENST00000505874 DIRC2Q96SL1 478 aa6.95□□□□□ -1.3
LINC00616-202ENST00000505874 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
LINC00616-202ENST00000505874 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC00616-202ENST00000505874 BTBD11A6QL63 1104 aa6.94□□□□□ -1.3
LINC00616-202ENST00000505874 HPXP02790 462 aa6.94□□□□□ -1.3
LINC00616-202ENST00000505874 ZGLP1P0C6A0 271 aa6.94□□□□□ -1.3
LINC00616-202ENST00000505874 TMC3Q7Z5M5 1100 aa6.94□□□□□ -1.3
LINC00616-202ENST00000505874 SYTL4Q96C24 671 aaPredicted RBP6.94□□□□□ -1.3
LINC00616-202ENST00000505874 FAM84AQ96KN4 292 aa6.94□□□□□ -1.3
LINC00616-202ENST00000505874 NSUN3Q9H649 340 aaKnown RBP6.94□□□□□ -1.3
LINC00616-202ENST00000505874 C19orf44Q9H6X5 657 aa6.94□□□□□ -1.3
LINC00616-202ENST00000505874 FAM86C2PA6NEL3 165 aa6.93□□□□□ -1.3
LINC00616-202ENST00000505874 CLEC3AO75596 197 aa6.93□□□□□ -1.3
LINC00616-202ENST00000505874 TEKQ02763 1124 aa6.93□□□□□ -1.3
LINC00616-202ENST00000505874 SNW1Q13573 536 aaKnown RBP6.93□□□□□ -1.3
LINC00616-202ENST00000505874 NBPF9Q3BBW0 867 aa6.93□□□□□ -1.3
LINC00616-202ENST00000505874 HDAC8Q9BY41 377 aa6.93□□□□□ -1.3
LINC00616-202ENST00000505874 NME1P15531 152 aaKnown RBP6.92□□□□□ -1.3
LINC00616-202ENST00000505874 JAG1P78504 1218 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 RAD51AP2Q09MP3 1159 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 FZD5Q13467 585 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
LINC00616-202ENST00000505874 TMEM192Q8IY95 271 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 PDZD8Q8NEN9 1154 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 SYTL5Q8TDW5 730 aaPredicted RBP6.92□□□□□ -1.3
LINC00616-202ENST00000505874 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
LINC00616-202ENST00000505874 RNF34Q969K3 372 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 KRTAP9-9Q9BYP9 154 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 RNF32Q9H0A6 362 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 KCNK12Q9HB15 430 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 SP110Q9HB58 689 aa6.92□□□□□ -1.3
LINC00616-202ENST00000505874 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
LINC00616-202ENST00000505874 MEIS3P2A8K0S8 358 aa6.91□□□□□ -1.3
LINC00616-202ENST00000505874 RECKO95980 971 aa6.91□□□□□ -1.3
LINC00616-202ENST00000505874 TIGD5Q53EQ6 642 aa6.91□□□□□ -1.3
LINC00616-202ENST00000505874 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
LINC00616-202ENST00000505874 OXR1Q8N573 874 aa6.91□□□□□ -1.3
LINC00616-202ENST00000505874 SLC6A18Q96N87 628 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms