RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 SERPINB13Q9UIV8 391 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 HDAC9Q9UKV0 1011 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 ZNF646O15015 1829 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-208ENST00000505728 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
COL4A5-208ENST00000505728 PLIN4Q96Q06 1357 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 PLEKHA8P1O95397 391 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 MMP1P03956 469 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 TOP1P11387 765 aaKnown RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 GUCY1A2P33402 732 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 NASPP49321 788 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 PKN1Q16512 942 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 CFAP100Q494V2 611 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 FAM177A1Q8N128 213 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 SRBD1Q8N5C6 995 aaKnown RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 LINC00301Q8NCQ3 95 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 PGBD1Q96JS3 809 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 GMLQ99445 158 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 TMEM47Q9BQJ4 181 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 DDX19AQ9NUU7 478 aaKnown RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 ZNRF3Q9ULT6 936 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 V9GY48 417 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-208ENST00000505728 MYH8P13535 1937 aa9.3□□□□□ -0.92
COL4A5-208ENST00000505728 IGKV6D-41A0A0C4DH26 115 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 A0A1W2PQ27 194 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 A0A1W2PQ64 194 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 A0A1W2PQD8 194 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 PSMD14O00487 310 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 SPTLC2O15270 562 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 STK38Q15208 465 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 ANO1Q5XXA6 986 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 ADALQ6DHV7 355 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 AGBL3Q8NEM8 1001 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 KCNG4Q8TDN1 519 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 GRPEL1Q9HAV7 217 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 SH3GLB2Q9NR46 395 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 GJB4Q9NTQ9 266 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 PI4KBQ9UBF8 816 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 STX8Q9UNK0 236 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 TRPM7Q96QT4 1865 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 CNTNAP5Q8WYK1 1306 aa9.29□□□□□ -0.92
COL4A5-208ENST00000505728 SYCE3A1L190 88 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 BTBD18B2RXH4 712 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 UBE2Q2LH0YL09 131 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 CAPN15O75808 1086 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 XRCC6P12956 609 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 CEBPZQ03701 1054 aaKnown RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 NFIAQ12857 509 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 SLC39A14Q15043 492 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 SF3A1Q15459 793 aaKnown RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 PFKFB3Q16875 520 aaPredicted RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 RILPL1Q5EBL4 403 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 METTL16Q86W50 562 aaKnown RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 LDHDQ86WU2 507 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 NOSTRINQ8IVI9 506 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 DIS3L2Q8IYB7 885 aaKnown RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 TNS4Q8IZW8 715 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 MTMR14Q8NCE2 650 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 BICD2Q8TD16 824 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 CEP95Q96GE4 821 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 PHF20Q9BVI0 1012 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 BRMS1Q9HCU9 246 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 MTMR4Q9NYA4 1195 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 TMOD2Q9NZR1 351 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 FAM198AQ9UFP1 575 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 CLIC4Q9Y696 253 aa9.28□□□□□ -0.92
COL4A5-208ENST00000505728 COL2A1P02458 1487 aaPredicted RBP9.28□□□□□ -0.92
COL4A5-208ENST00000505728 CNTNAP1P78357 1384 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 IQCA1LA6NCM1 817 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 FZD9O00144 591 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 PPP6R2O75170 966 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 RAD17O75943 681 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 TTLL1O95922 423 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 ITGBL1O95965 494 aaPredicted RBP9.27□□□□□ -0.93
COL4A5-208ENST00000505728 PARP1P09874 1014 aaKnown RBP9.27□□□□□ -0.93
COL4A5-208ENST00000505728 SCG2P13521 617 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 AKR1B1P15121 316 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 LIG1P18858 919 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 CALML3P27482 149 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 SHMT1P34896 483 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 KRT2P35908 639 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 ME1P48163 572 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 TNIP1Q15025 636 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 DLGAP5Q15398 846 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 FKBP1CQ5VVH2 108 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 GALNT17Q6IS24 598 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 CCDC73Q6ZRK6 1079 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 CCAR1Q8IX12 1150 aaKnown RBP9.27□□□□□ -0.93
COL4A5-208ENST00000505728 JDP2Q8WYK2 163 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms