RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 ATP8A2Q9NTI2 1148 aa14.74□□□□□ -0.05
SNHG4-202ENST00000505522 SWAP70Q9UH65 585 aa14.74□□□□□ -0.05
SNHG4-202ENST00000505522 BAZ2AQ9UIF9 1905 aaKnown RBP14.74□□□□□ -0.05
SNHG4-202ENST00000505522 PFASO15067 1338 aa14.73□□□□□ -0.05
SNHG4-202ENST00000505522 SLC15A5A6NIM6 579 aa14.73□□□□□ -0.05
SNHG4-202ENST00000505522 GLRX3O76003 335 aaKnown RBP14.73□□□□□ -0.05
SNHG4-202ENST00000505522 AKR1B1P15121 316 aa14.73□□□□□ -0.05
SNHG4-202ENST00000505522 C12orf60Q5U649 245 aa14.73□□□□□ -0.05
SNHG4-202ENST00000505522 LRRCC1Q9C099 1032 aa14.73□□□□□ -0.05
SNHG4-202ENST00000505522 ZMYND8Q9ULU4 1186 aaPredicted RBP14.73□□□□□ -0.05
SNHG4-202ENST00000505522 RLFQ13129 1914 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 USP17L12C9JPN9 530 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 USP17L21D6R901 530 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 HOXC6P09630 235 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 CDK8P49336 464 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 GRB14Q14449 540 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 COG2Q14746 738 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 UBE3CQ15386 1083 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 NPLOC4Q8TAT6 608 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 MOV10L1Q9BXT6 1211 aaKnown RBP14.72□□□□□ -0.05
SNHG4-202ENST00000505522 TANGO6Q9C0B7 1094 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 HOXC10Q9NYD6 342 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 IVNS1ABPQ9Y6Y0 642 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 MYH7P12883 1935 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 MYH8P13535 1937 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 A0A0G2JMZ2 1700 aa14.72□□□□□ -0.05
SNHG4-202ENST00000505522 COL6A1P12109 1028 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 SYN1P17600 705 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 ICA1Q05084 483 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 MFSD14CQ5VZR4 134 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 C16orf86Q6ZW13 317 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 GDF15Q99988 308 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 PUS7LQ9H0K6 701 aaKnown RBP14.71□□□□□ -0.05
SNHG4-202ENST00000505522 TMX2Q9Y320 296 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 SLC4A4Q9Y6R1 1079 aa14.71□□□□□ -0.05
SNHG4-202ENST00000505522 FRMPD3Q5JV73 1810 aa14.71□□□□□ -0.06
SNHG4-202ENST00000505522 A0A1W2PPC1 479 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 SOX1O00570 391 aaPredicted RBP14.7□□□□□ -0.06
SNHG4-202ENST00000505522 IGHA2P01877 340 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 CYP2C19P33261 490 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 CTR9Q6PD62 1173 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 SPICE1Q8N0Z3 855 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 LPAR1Q92633 364 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 CCDC17Q96LX7 622 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 SPATC1LQ9H0A9 340 aa14.7□□□□□ -0.06
SNHG4-202ENST00000505522 ERCC3P19447 782 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 ADORA2AP29274 412 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 DSG3P32926 999 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 BMP8BP34820 402 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 LRRC26Q2I0M4 334 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 AMOTL1Q8IY63 956 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 TRPV1Q8NER1 839 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 ATG4CQ96DT6 458 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 VCPKMTQ9H867 229 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 ARHGEF10LQ9HCE6 1279 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 ECHDC1Q9NTX5 307 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 ZNF236Q9UL36 1845 aa14.69□□□□□ -0.06
SNHG4-202ENST00000505522 LAMA3Q16787 3333 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 DNAH12Q6ZR08 3092 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 STRNO43815 780 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 COBLO75128 1261 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 FLOT1O75955 427 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 EEF2P13639 858 aaKnown RBP14.68□□□□□ -0.06
SNHG4-202ENST00000505522 CNGA1P29973 690 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 MAGEA10P43363 369 aaPredicted RBP14.68□□□□□ -0.06
SNHG4-202ENST00000505522 TSHZ3Q63HK5 1081 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 ZSCAN25Q6NSZ9 544 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
SNHG4-202ENST00000505522 DPP9Q86TI2 863 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 SHCBP1Q8NEM2 672 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 SH2D4AQ9H788 454 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 DDX20Q9UHI6 824 aaKnown RBP14.68□□□□□ -0.06
SNHG4-202ENST00000505522 PARP14Q460N5 1801 aa14.68□□□□□ -0.06
SNHG4-202ENST00000505522 WDR46O15213 610 aaKnown RBP14.67□□□□□ -0.06
SNHG4-202ENST00000505522 CYBAP13498 195 aa14.67□□□□□ -0.06
SNHG4-202ENST00000505522 PLS1Q14651 629 aa14.67□□□□□ -0.06
SNHG4-202ENST00000505522 OLFML2BQ68BL8 750 aa14.67□□□□□ -0.06
SNHG4-202ENST00000505522 MB21D1Q8N884 522 aa14.67□□□□□ -0.06
SNHG4-202ENST00000505522 LRCH3Q96II8 777 aa14.67□□□□□ -0.06
SNHG4-202ENST00000505522 STRBPQ96SI9 672 aaKnown RBP14.67□□□□□ -0.06
SNHG4-202ENST00000505522 DCTPP1Q9H773 170 aa14.67□□□□□ -0.06
SNHG4-202ENST00000505522 TMEM132BQ14DG7 1078 aa14.66□□□□□ -0.06
SNHG4-202ENST00000505522 NCAPG2Q86XI2 1143 aa14.66□□□□□ -0.06
SNHG4-202ENST00000505522 KBTBD3Q8NAB2 608 aa14.66□□□□□ -0.06
SNHG4-202ENST00000505522 OSBP2Q969R2 916 aa14.66□□□□□ -0.06
SNHG4-202ENST00000505522 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNHG4-202ENST00000505522 SENP6Q9GZR1 1112 aaPredicted RBP14.66□□□□□ -0.06
SNHG4-202ENST00000505522 KANSL2Q9H9L4 492 aa14.66□□□□□ -0.06
SNHG4-202ENST00000505522 FBXO28Q9NVF7 368 aa14.66□□□□□ -0.06
SNHG4-202ENST00000505522 ARPP21Q9UBL0 812 aaPredicted RBP14.66□□□□□ -0.06
SNHG4-202ENST00000505522 COL11A1P12107 1806 aaPredicted RBP14.65□□□□□ -0.06
SNHG4-202ENST00000505522 GSG1L2A8MUP6 293 aa14.65□□□□□ -0.06
SNHG4-202ENST00000505522 MSCO60682 206 aa14.65□□□□□ -0.06
SNHG4-202ENST00000505522 STK11IPQ8N1F8 1099 aa14.65□□□□□ -0.06
SNHG4-202ENST00000505522 MROH8Q9H579 483 aa14.65□□□□□ -0.06
SNHG4-202ENST00000505522 ADAMTS5Q9UNA0 930 aa14.65□□□□□ -0.06
SNHG4-202ENST00000505522 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
SNHG4-202ENST00000505522 RASA1P20936 1047 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms