RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 TUBB4BP68371 445 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 SCARF1Q14162 830 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 ICE2Q659A1 982 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 FOXR1Q6PIV2 292 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 CYB5R4Q7L1T6 521 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 FOXP4Q8IVH2 680 aaPredicted RBP8.97□□□□□ -0.97
PROM1-206ENST00000505450 DNAJC10Q8IXB1 793 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 PNKPQ96T60 521 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 NAA15Q9BXJ9 866 aaKnown RBP8.97□□□□□ -0.97
PROM1-206ENST00000505450 KRT23Q9C075 422 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 HDAC6Q9UBN7 1215 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 WDR17Q8IZU2 1322 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 TBC1D8BQ0IIM8 1120 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 SF3A3Q12874 501 aaKnown RBP eCLIP8.97□□□□□ -0.97
PROM1-206ENST00000505450 CCDC178Q5BJE1 867 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 CACNA2D4Q7Z3S7 1137 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 IQCA1Q86XH1 822 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 JAKMIP2Q96AA8 810 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 TUBE1Q9UJT0 475 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 FER1L4A9Z1Z3 1794 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 LOC102724428A0A0B4J2F2 783 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 DEXIO95424 95 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 SIK1P57059 783 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 KRT83P78385 493 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 NOA1Q8NC60 698 aaKnown RBP8.97□□□□□ -0.97
PROM1-206ENST00000505450 NELFBQ8WX92 580 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 TEX13AQ9BXU3 409 aaPredicted RBP8.97□□□□□ -0.97
PROM1-206ENST00000505450 MMRN2Q9H8L6 949 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 EFCC1Q9HA90 598 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 POLD4Q9HCU8 107 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 IFT172Q9UG01 1749 aa8.97□□□□□ -0.97
PROM1-206ENST00000505450 A0A0U1RQJ8 604 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 RIMBP2O15034 1052 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 GNGT1P63211 74 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 PAK1Q13153 545 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 TUBB2AQ13885 445 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 KCTD16Q68DU8 428 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 SMIM5Q71RC9 77 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 MB21D2Q8IYB1 491 aaPredicted RBP8.96□□□□□ -0.97
PROM1-206ENST00000505450 SYMPKQ92797 1274 aaKnown RBP8.96□□□□□ -0.97
PROM1-206ENST00000505450 DCAF5Q96JK2 942 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 TUBB2BQ9BVA1 445 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 MED4Q9NPJ6 270 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 DLC1Q96QB1 1528 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 KRT2P35908 639 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 MAGEA9P43362 315 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 MUM1L1Q5H9M0 696 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 CEP57Q86XR8 500 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 TBC1D10CQ8IV04 446 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 ANKRD18AQ8IVF6 992 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 OR8K1Q8NGG5 319 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 NLRP3Q96P20 1036 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.97
PROM1-206ENST00000505450 RNF41Q9H4P4 317 aaPredicted RBP8.96□□□□□ -0.97
PROM1-206ENST00000505450 BAZ2BQ9UIF8 2168 aaKnown RBP8.96□□□□□ -0.98
PROM1-206ENST00000505450 TACC1O75410 805 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 IFIT1BQ5T764 474 aaKnown RBP8.96□□□□□ -0.98
PROM1-206ENST00000505450 PIK3AP1Q6ZUJ8 805 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 LARGE2Q8N3Y3 721 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 ANKRD13CQ8N6S4 541 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 EHBP1Q8NDI1 1231 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 CNNM2Q9H8M5 875 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 ZSWIM5Q9P217 1185 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 ASAP1Q9ULH1 1129 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 COL15A1P39059 1388 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 C1orf167Q5SNV9 1468 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 CCDC194A0A1B0GVG4 234 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 KCNJ18B7U540 433 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 PSMA7O14818 248 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 MFAP3LO75121 409 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 CYP7A1P22680 504 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 EPS15P42566 896 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 ANTXR2P58335 489 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 ARID5AQ03989 594 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 KCNJ12Q14500 433 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 NLGN1Q8N2Q7 840 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 CDK5RAP3Q96JB5 506 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 TRIM10Q9UDY6 481 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 TFR2Q9UP52 801 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
PROM1-206ENST00000505450 OPA1O60313 960 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 ERCC5P28715 1186 aaPredicted RBP8.95□□□□□ -0.98
PROM1-206ENST00000505450 HPDP32754 393 aaPredicted RBP8.95□□□□□ -0.98
PROM1-206ENST00000505450 GUCY1A2P33402 732 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 FXR1P51114 621 aaKnown RBP eCLIP8.95□□□□□ -0.98
PROM1-206ENST00000505450 COPB1P53618 953 aaKnown RBP8.95□□□□□ -0.98
PROM1-206ENST00000505450 CYP27A1Q02318 531 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 MORC3Q14149 939 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 OXER1Q8TDS5 423 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
PROM1-206ENST00000505450 PANX2Q96RD6 677 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 CAPN7Q9Y6W3 813 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 SH2B2O14492 632 aaPredicted RBP8.95□□□□□ -0.98
PROM1-206ENST00000505450 PDE6AP16499 860 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 ITGA6P23229 1130 aa8.95□□□□□ -0.98
PROM1-206ENST00000505450 RFX5P48382 616 aaPredicted RBP8.95□□□□□ -0.98
PROM1-206ENST00000505450 BEND6Q5SZJ8 279 aaPredicted RBP8.95□□□□□ -0.98
PROM1-206ENST00000505450 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms