RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	NCAPG2	Q86XI2	1143 aa		19.64	■□□□□ 0.73
DDR1-256	ENST00000505066	SHCBP1	Q8NEM2	672 aa		19.64	■□□□□ 0.73
DDR1-256	ENST00000505066	USP6NL	Q92738	828 aa		19.64	■□□□□ 0.73
DDR1-256	ENST00000505066	PRKAG2	Q9UGJ0	569 aa		19.64	■□□□□ 0.73
DDR1-256	ENST00000505066	WDR46	O15213	610 aa	Known RBP	19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	ZFY	P08048	801 aa	Predicted RBP	19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	CYP2D6	P10635	497 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	CDK8	P49336	464 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	CCL14	Q16627	93 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	C12orf60	Q5U649	245 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	DYNLL2	Q96FJ2	89 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	SPATC1L	Q9H0A9	340 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	STAP2	Q9UGK3	403 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	TMX2	Q9Y320	296 aa		19.63	■□□□□ 0.73
DDR1-256	ENST00000505066	ATAD5	Q96QE3	1844 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	PRKAB2	O43741	272 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	SLC25A27	O95847	323 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	APP	P05067	770 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	HOXC6	P09630	235 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	CCND3	P30281	292 aa	Predicted RBP	19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	COPB2	P35606	906 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	GRB14	Q14449	540 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	SPICE1	Q8N0Z3	855 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	SLC44A5	Q8NCS7	719 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	ARRDC4	Q8NCT1	418 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	VCPKMT	Q9H867	229 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	BTBD7	Q9P203	1132 aa		19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	19.62	■□□□□ 0.73
DDR1-256	ENST00000505066	ERC2	O15083	957 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	CNMD	O75829	334 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	FCER1A	P12319	257 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	GNAT2	P19087	354 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	DSG3	P32926	999 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	GUCY1A2	P33402	732 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	C16orf86	Q6ZW13	317 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	LBHD1	Q9BQE6	289 aa	Predicted RBP	19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	MOV10L1	Q9BXT6	1211 aa	Known RBP	19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	NACAP1	Q9BZK3	213 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	DDX20	Q9UHI6	824 aa	Known RBP	19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	CENPF	P49454	3210 aa		19.61	■□□□□ 0.73
DDR1-256	ENST00000505066	SLC3A2	P08195	630 aa	Known RBP	19.6	■□□□□ 0.73
DDR1-256	ENST00000505066	AKR1B1	P15121	316 aa		19.6	■□□□□ 0.73
DDR1-256	ENST00000505066	ERCC3	P19447	782 aa		19.6	■□□□□ 0.73
DDR1-256	ENST00000505066	ADORA2A	P29274	412 aa		19.6	■□□□□ 0.73
DDR1-256	ENST00000505066	KCTD2	Q14681	263 aa		19.6	■□□□□ 0.73
DDR1-256	ENST00000505066	GIMAP6	Q6P9H5	292 aa		19.6	■□□□□ 0.73
DDR1-256	ENST00000505066		A0A1W2PRG0	241 aa		19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	KBTBD13	C9JR72	458 aa		19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	MYCN	P04198	464 aa	Predicted RBP	19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	TDO2	P48775	406 aa		19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	OLFML2B	Q68BL8	750 aa		19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	ABRA	Q8N0Z2	381 aa		19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	UBE2O	Q9C0C9	1292 aa	Known RBP	19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	SENP6	Q9GZR1	1112 aa	Predicted RBP	19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	CEP290	O15078	2479 aa		19.59	■□□□□ 0.73
DDR1-256	ENST00000505066	MINDY4B	A8MYZ0	360 aa		19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	SMARCA5	O60264	1052 aa	Predicted RBP	19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	EEF2	P13639	858 aa	Known RBP	19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	SYN1	P17600	705 aa		19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	CYP2C19	P33261	490 aa		19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	BMP8B	P34820	402 aa		19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	ZNF444	Q8N0Y2	327 aa	Predicted RBP	19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	KBTBD3	Q8NAB2	608 aa		19.58	■□□□□ 0.72
DDR1-256	ENST00000505066	MYH1	P12882	1939 aa		19.57	■□□□□ 0.72
DDR1-256	ENST00000505066	RNF113A	O15541	343 aa	Known RBP	19.57	■□□□□ 0.72
DDR1-256	ENST00000505066	LHX8	Q68G74	356 aa		19.57	■□□□□ 0.72
DDR1-256	ENST00000505066	CTR9	Q6PD62	1173 aa		19.57	■□□□□ 0.72
DDR1-256	ENST00000505066	APPBP2	Q92624	585 aa		19.57	■□□□□ 0.72
DDR1-256	ENST00000505066	ATG4C	Q96DT6	458 aa		19.57	■□□□□ 0.72
DDR1-256	ENST00000505066	SIPA1L1	O43166	1804 aa		19.57	■□□□□ 0.72
DDR1-256	ENST00000505066	FOCAD	Q5VW36	1801 aa		19.56	■□□□□ 0.72
DDR1-256	ENST00000505066	CYP2D7	A0A087X1C5	515 aa		19.56	■□□□□ 0.72
DDR1-256	ENST00000505066	DNM1L	O00429	736 aa		19.56	■□□□□ 0.72
DDR1-256	ENST00000505066	MMP19	Q99542	508 aa		19.56	■□□□□ 0.72
DDR1-256	ENST00000505066	PUS7L	Q9H0K6	701 aa	Known RBP	19.56	■□□□□ 0.72
DDR1-256	ENST00000505066	DCTPP1	Q9H773	170 aa		19.56	■□□□□ 0.72
DDR1-256	ENST00000505066	ISY1	Q9ULR0	285 aa	Known RBP	19.56	■□□□□ 0.72
DDR1-256	ENST00000505066	SBK1	Q52WX2	424 aa		19.55	■□□□□ 0.72
DDR1-256	ENST00000505066	PPP4R3B	Q5MIZ7	849 aa		19.55	■□□□□ 0.72
DDR1-256	ENST00000505066	C20orf194	Q5TEA3	1177 aa		19.55	■□□□□ 0.72
DDR1-256	ENST00000505066	NPLOC4	Q8TAT6	608 aa		19.55	■□□□□ 0.72
DDR1-256	ENST00000505066	STRBP	Q96SI9	672 aa	Known RBP	19.55	■□□□□ 0.72
DDR1-256	ENST00000505066	PRO3102	Q9H379	93 aa		19.55	■□□□□ 0.72
DDR1-256	ENST00000505066	STAT3	P40763	770 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	MAGEA10	P43363	369 aa	Predicted RBP	19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	PDE4B	Q07343	736 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	SLFNL1	Q499Z3	407 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	POTEE	Q6S8J3	1075 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	STK11IP	Q8N1F8	1099 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	GDF15	Q99988	308 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	FLRT1	Q9NZU1	646 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	CNPY2	Q9Y2B0	182 aa		19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	MKI67	P46013	3256 aa	Known RBP	19.54	■□□□□ 0.72
DDR1-256	ENST00000505066	TTC41P	Q6P2S7	1318 aa		19.53	■□□□□ 0.72
DDR1-256	ENST00000505066	TRIOBP	Q9H2D6	2365 aa		19.53	■□□□□ 0.72
DDR1-256	ENST00000505066	SEPT4	O43236	478 aa		19.53	■□□□□ 0.72
DDR1-256	ENST00000505066	ZBED4	O75132	1171 aa		19.53	■□□□□ 0.72
DDR1-256	ENST00000505066	COL6A1	P12109	1028 aa		19.53	■□□□□ 0.72
DDR1-256	ENST00000505066	EVX2	Q03828	476 aa		19.53	■□□□□ 0.72
DDR1-256	ENST00000505066	CLEC10A	Q8IUN9	316 aa		19.53	■□□□□ 0.72

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