RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 LDHCP07864 332 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 CYBAP13498 195 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 GRB14Q14449 540 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 RASIP1Q5U651 963 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 USP38Q8NB14 1042 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 TRIM43Q96BQ3 446 aaPredicted RBP7.47□□□□□ -1.21
GYPB-204ENST00000504951 PORCNQ9H237 461 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 THEGQ9P2T0 379 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 MROH7-TTC4A0A0A0MT08 1334 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 MYH2Q9UKX2 1941 aa7.46□□□□□ -1.21
GYPB-204ENST00000504951 KBTBD13C9JR72 458 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 DNAJB2P25686 324 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 ATP2B2Q01814 1243 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 RRP1BQ14684 758 aaKnown RBP7.46□□□□□ -1.22
GYPB-204ENST00000504951 ANKRD33Q7Z3H0 272 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 CCDC84Q86UT8 332 aaPredicted RBP7.46□□□□□ -1.22
GYPB-204ENST00000504951 CCAR1Q8IX12 1150 aaKnown RBP7.46□□□□□ -1.22
GYPB-204ENST00000504951 ADAMTS19Q8TE59 1207 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 DDX27Q96GQ7 796 aaKnown RBP7.46□□□□□ -1.22
GYPB-204ENST00000504951 UHRF1Q96T88 793 aaPredicted RBP7.46□□□□□ -1.22
GYPB-204ENST00000504951 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.22
GYPB-204ENST00000504951 USP44Q9H0E7 712 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 FLRT1Q9NZU1 646 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 CEP126Q9P2H0 1117 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 PHF24Q9UPV7 400 aa7.46□□□□□ -1.22
GYPB-204ENST00000504951 FRMPD3Q5JV73 1810 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L15C9J2P7 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L13C9JLJ4 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L11C9JVI0 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L18D6R9N7 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L22D6RA61 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L17D6RBQ6 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L19D6RCP7 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L20D6RJB6 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 CNMDO75829 334 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 SLURP2P0DP57 97 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 BMP1P13497 986 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 POU3F3P20264 500 aaPredicted RBP7.45□□□□□ -1.22
GYPB-204ENST00000504951 IL15P40933 162 aaPredicted RBP7.45□□□□□ -1.22
GYPB-204ENST00000504951 BTDP43251 543 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 PPP4CP60510 307 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 GSTO1P78417 241 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L24Q0WX57 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 MTMR2Q13614 643 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 ATP2B3Q16720 1220 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 CATSPERGQ6ZRH7 1159 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 DZIP1Q86YF9 867 aaKnown RBP7.45□□□□□ -1.22
GYPB-204ENST00000504951 ABRAQ8N0Z2 381 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 TRPV1Q8NER1 839 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 ZNF384Q8TF68 577 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
GYPB-204ENST00000504951 GAS2L1Q99501 681 aaPredicted RBP7.45□□□□□ -1.22
GYPB-204ENST00000504951 MRS2Q9HD23 443 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 EMILIN3Q9NT22 766 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
GYPB-204ENST00000504951 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.45□□□□□ -1.22
GYPB-204ENST00000504951 RAPGEFL1Q9UHV5 662 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 ATP11BQ9Y2G3 1177 aa7.45□□□□□ -1.22
GYPB-204ENST00000504951 MYH13Q9UKX3 1938 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 GPR37L1O60883 481 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 CLTBP09497 229 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 ITGB8P26012 769 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 PHKA1P46020 1223 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 MECOMQ03112 1051 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 TLE2Q04725 743 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 PICALMQ13492 652 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 LRRC41Q15345 812 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 AAK1Q2M2I8 961 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 TRIM60Q495X7 471 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 SLC4A10Q6U841 1118 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 ERICH6Q7L0X2 663 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 SH3RF1Q7Z6J0 888 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 SHCBP1Q8NEM2 672 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 KLHDC4Q8TBB5 520 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 NSUN4Q96CB9 384 aaKnown RBP7.44□□□□□ -1.22
GYPB-204ENST00000504951 TSEN34Q9BSV6 310 aaKnown RBP7.44□□□□□ -1.22
GYPB-204ENST00000504951 ADAM33Q9BZ11 813 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 COPRSQ9NQ92 184 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 SLC5A4Q9NY91 659 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 HDAC5Q9UQL6 1122 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 PTPRCP08575 1304 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 ROBO3Q96MS0 1386 aa7.44□□□□□ -1.22
GYPB-204ENST00000504951 TIMP1P01033 207 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 USP14P54578 494 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 EPHB4P54760 987 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 FPGSQ05932 587 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 GJC2Q5T442 439 aaPredicted RBP7.43□□□□□ -1.22
GYPB-204ENST00000504951 ANKK1Q8NFD2 765 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 NPLOC4Q8TAT6 608 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 LRFN3Q9BTN0 628 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 KIAA1683Q9H0B3 1180 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 RABGEF1Q9UJ41 708 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 HCN4Q9Y3Q4 1203 aa7.43□□□□□ -1.22
GYPB-204ENST00000504951 IVNS1ABPQ9Y6Y0 642 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms