RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CAVIN1Q6NZI2 390 aaKnown RBP15.36■□□□□ 0.05
LMNA-220ENST00000504687 ZFPM1Q8IX07 1006 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 KCNG4Q8TDN1 519 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 USP28Q96RU2 1077 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 TMEM63CQ9P1W3 806 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 NYAP2Q9P242 653 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 ZNF70Q9UC06 446 aaPredicted RBP15.36■□□□□ 0.05
LMNA-220ENST00000504687 STX8Q9UNK0 236 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
LMNA-220ENST00000504687 SCG2P13521 617 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 MAP3K10Q02779 954 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 ZSCAN23Q3MJ62 389 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 ASPRV1Q53RT3 343 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 GALNT17Q6IS24 598 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 NOSTRINQ8IVI9 506 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 LINC00301Q8NCQ3 95 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 TFIP11Q9UBB9 837 aaKnown RBP15.35■□□□□ 0.05
LMNA-220ENST00000504687 V9GY48 417 aaPredicted RBP15.35■□□□□ 0.05
LMNA-220ENST00000504687 CNTNAP1P78357 1384 aa15.35■□□□□ 0.05
LMNA-220ENST00000504687 A0A1W2PQ27 194 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 A0A1W2PQ64 194 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 A0A1W2PQD8 194 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 MYO1BO43795 1136 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 PARP1P09874 1014 aaKnown RBP15.34■□□□□ 0.05
LMNA-220ENST00000504687 RILPL1Q5EBL4 403 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 CCDC183Q5T5S1 534 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 TMEM179Q6ZVK1 233 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 DIS3L2Q8IYB7 885 aaKnown RBP15.34■□□□□ 0.05
LMNA-220ENST00000504687 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
LMNA-220ENST00000504687 PGBD1Q96JS3 809 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 KANSL2Q9H9L4 492 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.34■□□□□ 0.05
LMNA-220ENST00000504687 GJB4Q9NTQ9 266 aa15.34■□□□□ 0.05
LMNA-220ENST00000504687 SBF1O95248 1867 aa15.33■□□□□ 0.05
LMNA-220ENST00000504687 PPP6R2O75170 966 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 PDHBP11177 359 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 CALML3P27482 149 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 DEKP35659 375 aaKnown RBP15.33■□□□□ 0.04
LMNA-220ENST00000504687 TCP10Q12799 353 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 SLC39A14Q15043 492 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 CERKLQ49MI3 558 aaPredicted RBP15.33■□□□□ 0.04
LMNA-220ENST00000504687 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.04
LMNA-220ENST00000504687 ANO1Q5XXA6 986 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 ADALQ6DHV7 355 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.04
LMNA-220ENST00000504687 STAG2Q8N3U4 1231 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 DAGLBQ8NCG7 672 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
LMNA-220ENST00000504687 RIOX1Q9H6W3 641 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 PGAP2Q9UHJ9 254 aa15.33■□□□□ 0.04
LMNA-220ENST00000504687 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
LMNA-220ENST00000504687 GOLGA6L4A6NEF3 574 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 KLRF2D3W0D1 207 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 KRT2P35908 639 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 FOSBP53539 338 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 CACNB3P54284 484 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
LMNA-220ENST00000504687 NPY5RQ15761 445 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 GPATCH4Q5T3I0 446 aaKnown RBP15.32■□□□□ 0.04
LMNA-220ENST00000504687 TNFRSF25Q93038 417 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 SHISA4Q96DD7 197 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 TRIM34Q9BYJ4 488 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 BRMS1Q9HCU9 246 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 MYOZ2Q9NPC6 264 aa15.32■□□□□ 0.04
LMNA-220ENST00000504687 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
LMNA-220ENST00000504687 GOLGA6L3A6NEY3 463 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 BTBD18B2RXH4 712 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 WNT10BO00744 389 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 CYTH3O43739 400 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 PRELPP51888 382 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 GNL2Q13823 731 aaKnown RBP15.31■□□□□ 0.04
LMNA-220ENST00000504687 PTPAQ15257 358 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 SLC35G1Q2M3R5 365 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 LRSAM1Q6UWE0 723 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 ZSCAN29Q8IWY8 852 aaPredicted RBP15.31■□□□□ 0.04
LMNA-220ENST00000504687 CCDC82Q8N4S0 544 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 JMYQ8N9B5 988 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 CSRNP1Q96S65 589 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 GINM1Q9NU53 330 aa15.31■□□□□ 0.04
LMNA-220ENST00000504687 SRCAPQ6ZRS2 3230 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 FAM237AA0A1B0GTK4 181 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 SPTLC2O15270 562 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 BMP15O95972 392 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 TRAPPC10P48553 1259 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 TNNI2P48788 182 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 MRE11P49959 708 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 ZNF543Q08ER8 600 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 RBM43Q6ZSC3 357 aaKnown RBP15.3■□□□□ 0.04
LMNA-220ENST00000504687 GMCL1P1Q8NEA9 526 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
LMNA-220ENST00000504687 DCAF4Q8WV16 495 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 BARHL2Q9NY43 387 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 VPS54Q9P1Q0 977 aa15.3■□□□□ 0.04
LMNA-220ENST00000504687 CLIP2Q9UDT6 1046 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms