RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 PHKBQ93100 1093 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 DEFB129Q9H1M3 183 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 NAP1L2Q9ULW6 460 aaPredicted RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 TCHHQ07283 1943 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
TPM3-217ENST00000504663 TNNI2P48788 182 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 TNFAIP1Q13829 316 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 PKN1Q16512 942 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 NBPF12Q5TAG4 269 aaPredicted RBP12.12□□□□□ -0.47
TPM3-217ENST00000504663 DLK2Q6UY11 383 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 TMEM179Q6ZVK1 233 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
TPM3-217ENST00000504663 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
TPM3-217ENST00000504663 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 MKL1Q969V6 931 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM3-217ENST00000504663 GJB4Q9NTQ9 266 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 STX8Q9UNK0 236 aa12.12□□□□□ -0.47
TPM3-217ENST00000504663 PTPRFP10586 1907 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 BAZ2BQ9UIF8 2168 aaKnown RBP12.11□□□□□ -0.47
TPM3-217ENST00000504663 A0A1W2PRG0 241 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 CYTH3O43739 400 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 TTLL1O95922 423 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 F13A1P00488 732 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 GH2P01242 217 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 CALM1P0DP23 149 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 CALM2P0DP24 149 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 CALM3P0DP25 149 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
TPM3-217ENST00000504663 PDHBP11177 359 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 RESTQ13127 1097 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 PPP2R5BQ15173 497 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 ABCB5Q2M3G0 1257 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 RBM28Q9NW13 759 aaKnown RBP12.11□□□□□ -0.47
TPM3-217ENST00000504663 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
TPM3-217ENST00000504663 ZNF112Q9UJU3 913 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 PPP2R3BQ9Y5P8 575 aa12.11□□□□□ -0.47
TPM3-217ENST00000504663 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
TPM3-217ENST00000504663 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
TPM3-217ENST00000504663 VEGFAP15692 232 aaPredicted RBP12.1□□□□□ -0.47
TPM3-217ENST00000504663 CAP2P40123 477 aa12.1□□□□□ -0.47
TPM3-217ENST00000504663 KIAA1755Q5JYT7 1200 aa12.1□□□□□ -0.47
TPM3-217ENST00000504663 LARP1BQ659C4 914 aaKnown RBP12.1□□□□□ -0.47
TPM3-217ENST00000504663 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
TPM3-217ENST00000504663 RGS22Q8NE09 1264 aa12.1□□□□□ -0.47
TPM3-217ENST00000504663 RNF26Q9BY78 433 aaPredicted RBP12.1□□□□□ -0.47
TPM3-217ENST00000504663 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
TPM3-217ENST00000504663 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
TPM3-217ENST00000504663 RLFQ13129 1914 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 KIF28PB7ZC32 967 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 CDKL5O76039 1030 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 BAG4O95429 457 aaKnown RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 LMOD1P29536 600 aaPredicted RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 EPHX2P34913 555 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 ICA1Q05084 483 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 NFKBIBQ15653 356 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 NPY5RQ15761 445 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 FOXD4L5Q5VV16 416 aaPredicted RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 PRAMEF18Q5VWM3 479 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 SYNE3Q6ZMZ3 975 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 CCDC84Q86UT8 332 aaPredicted RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 FOXD4L4Q8WXT5 416 aaPredicted RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 GLIS2Q9BZE0 524 aaPredicted RBP12.09□□□□□ -0.47
TPM3-217ENST00000504663 CPVLQ9H3G5 476 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 FZD1Q9UP38 647 aa12.09□□□□□ -0.47
TPM3-217ENST00000504663 LOC285556D6RIA3 1793 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 CPLX1O14810 134 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 GOLGA8HP0CJ92 632 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 PDCP20941 246 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 INPP5BP32019 993 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 ECE1P42892 770 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 FOSBP53539 338 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 ZNF543Q08ER8 600 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 GMCL1P1Q8NEA9 526 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 FBXO18Q8NFZ0 1043 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 CTCFLQ8NI51 663 aaPredicted RBP12.08□□□□□ -0.48
TPM3-217ENST00000504663 ALG1Q9BT22 464 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 SPZ1Q9BXG8 430 aa12.08□□□□□ -0.48
TPM3-217ENST00000504663 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms