RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 TRPV1Q8NER1 839 aa14.66□□□□□ -0.06
NEDD9-209ENST00000504634 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
NEDD9-209ENST00000504634 SPATC1LQ9H0A9 340 aa14.66□□□□□ -0.06
NEDD9-209ENST00000504634 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
NEDD9-209ENST00000504634 A0A1W2PRG0 241 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 KBTBD13C9JR72 458 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 CYBAP13498 195 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 ERCC3P19447 782 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 GABPAQ06546 454 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 ANO1Q5XXA6 986 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 OLFML2BQ68BL8 750 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 TMEM179Q6ZVK1 233 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 NCAPG2Q86XI2 1143 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 SHCBP1Q8NEM2 672 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 SDR42E1Q8WUS8 393 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 FAM161BQ96MY7 647 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 PRDM5Q9NQX1 630 aaPredicted RBP14.65□□□□□ -0.06
NEDD9-209ENST00000504634 UNC80Q8N2C7 3258 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 ZNF532Q9HCE3 1301 aa14.65□□□□□ -0.06
NEDD9-209ENST00000504634 APBB1O00213 710 aa14.64□□□□□ -0.07
NEDD9-209ENST00000504634 GOLIM4O00461 696 aa14.64□□□□□ -0.07
NEDD9-209ENST00000504634 FLOT1O75955 427 aa14.64□□□□□ -0.07
NEDD9-209ENST00000504634 FAM109BQ6ICB4 259 aaPredicted RBP14.64□□□□□ -0.07
NEDD9-209ENST00000504634 CLASRPQ8N2M8 674 aaKnown RBP14.64□□□□□ -0.07
NEDD9-209ENST00000504634 MB21D1Q8N884 522 aa14.64□□□□□ -0.07
NEDD9-209ENST00000504634 MROH8Q9H579 483 aa14.64□□□□□ -0.07
NEDD9-209ENST00000504634 SH2D4AQ9H788 454 aa14.64□□□□□ -0.07
NEDD9-209ENST00000504634 ARHGEF10LQ9HCE6 1279 aa14.64□□□□□ -0.07
NEDD9-209ENST00000504634 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 SEPT4O43236 478 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 IFIT2P09913 472 aaKnown RBP14.63□□□□□ -0.07
NEDD9-209ENST00000504634 CYP2D6P10635 497 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 HNRNPUQ00839 825 aaKnown RBP eCLIP14.63□□□□□ -0.07
NEDD9-209ENST00000504634 EVX2Q03828 476 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 ICA1Q05084 483 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 ZNF697Q5TEC3 545 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 SPICE1Q8N0Z3 855 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 RHPN1Q8TCX5 695 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 DCP1AQ9NPI6 582 aaPredicted RBP14.63□□□□□ -0.07
NEDD9-209ENST00000504634 SWAP70Q9UH65 585 aa14.63□□□□□ -0.07
NEDD9-209ENST00000504634 COBLO75128 1261 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 DSG3P32926 999 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 SLC39A5Q6ZMH5 540 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 AMOTL1Q8IY63 956 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 LCORLQ8N3X6 602 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 PANK1Q8TE04 598 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 DYNLL2Q96FJ2 89 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 ARMT1Q9H993 441 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 FOCADQ5VW36 1801 aa14.62□□□□□ -0.07
NEDD9-209ENST00000504634 IGHA2P01877 340 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 FCER1AP12319 257 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 AKR1B1P15121 316 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 ADCYAP1R1P41586 468 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 TRIM60Q495X7 471 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.61□□□□□ -0.07
NEDD9-209ENST00000504634 ABRAQ8N0Z2 381 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.61□□□□□ -0.07
NEDD9-209ENST00000504634 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 ATG4CQ96DT6 458 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 KIF1BPQ96EK5 621 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 DDRGK1Q96HY6 314 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 GUCD1Q96NT3 240 aa14.61□□□□□ -0.07
NEDD9-209ENST00000504634 TCRBV5S4A2TA0A5A2 114 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
NEDD9-209ENST00000504634 RAD21O60216 631 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 HMMRO75330 724 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 MBD4O95243 580 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 SHHQ15465 462 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 KIAA1755Q5JYT7 1200 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 CLEC10AQ8IUN9 316 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 BADQ92934 168 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 MAML3Q96JK9 1138 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.6□□□□□ -0.07
NEDD9-209ENST00000504634 VCPKMTQ9H867 229 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 ATP8A2Q9NTI2 1148 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 TMX2Q9Y320 296 aa14.6□□□□□ -0.07
NEDD9-209ENST00000504634 CDK5RAP2Q96SN8 1893 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 PRKAB2O43741 272 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 SLC25A27O95847 323 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 RARBP10826 455 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 LRRC41Q15345 812 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 CCDC17Q96LX7 622 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 MMP19Q99542 508 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 PAG1Q9NWQ8 432 aa14.59□□□□□ -0.07
NEDD9-209ENST00000504634 MYH1P12882 1939 aa14.58□□□□□ -0.07
NEDD9-209ENST00000504634 MS4A1P11836 297 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 CDK8P49336 464 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 KCTD2Q14681 263 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 TMEM132BQ14DG7 1078 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 FAM47AQ5JRC9 791 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 C9orf50Q5SZB4 431 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 SIAH1Q8IUQ4 282 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 RPAP2Q8IXW5 612 aaPredicted RBP14.58□□□□□ -0.08
NEDD9-209ENST00000504634 COL25A1Q9BXS0 654 aaPredicted RBP14.58□□□□□ -0.08
NEDD9-209ENST00000504634 BOLA2Q9H3K6 86 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 XPNPEP3Q9NQH7 507 aa14.58□□□□□ -0.08
NEDD9-209ENST00000504634 MYO5AQ9Y4I1 1855 aaKnown RBP14.57□□□□□ -0.08
NEDD9-209ENST00000504634 CYP2D7A0A087X1C5 515 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms