RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 SPG7Q9UQ90 795 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 POTEFA5A3E0 1075 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 GOLGA6L19H0YKK7 550 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 DHX16O60231 1041 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 FZD7O75084 574 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 MTA2O94776 668 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 MX1P20591 662 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PKN1Q16512 942 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 DNAJC21Q5F1R6 531 aaKnown RBP3.21□□□□□ -1.9
NEDD4-204ENST00000503468 MAP3K21Q5TCX8 1036 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 GMCL1P1Q8NEA9 526 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PAGR1Q9BTK6 254 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 TBC1D7Q9P0N9 293 aa3.21□□□□□ -1.9
NEDD4-204ENST00000503468 PASKQ96RG2 1323 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 A0A087WZG4 1122 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 GTPBP10A4D1E9 387 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 RIOK3O14730 519 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ICAM3P32942 547 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ACTN2P35609 894 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MCTP1Q6DN14 999 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 SULT6B1Q6IMI4 303 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 GALNT17Q6IS24 598 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 FBXO18Q8NFZ0 1043 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 OR6Y1Q8NGX8 325 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MRFAP1L1Q96HT8 127 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 NUCKS1Q9H1E3 243 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ATP8A2Q9NTI2 1148 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MYO6Q9UM54 1294 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ATP6V0A2Q9Y487 856 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MOXD2PA6NHM9 499 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 PATL2C9JE40 543 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 KDM4AO75164 1064 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MYBP10242 640 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 PCDH1Q08174 1060 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 SNW1Q13573 536 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 SNX17Q15036 470 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 NOL8Q76FK4 1167 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ARMCX2Q7L311 632 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ZNF467Q7Z7K2 595 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ZCRB1Q8TBF4 217 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ZC3H15Q8WU90 426 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MEIS3Q99687 375 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 BATF3Q9NR55 127 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 E9PQ18 207 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 PRPF40AO75400 957 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MAPTP10636 758 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 DDX46Q7L014 1031 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC50Q8IVM0 306 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ZNF710Q8N1W2 664 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 USP33Q8TEY7 942 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 LEO1Q8WVC0 666 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MPHOSPH8Q99549 860 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 PRO3102Q9H379 93 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 PCDHA3Q9Y5H8 950 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 SCN8AQ9UQD0 1980 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 VIL1P09327 827 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 WEE1P30291 646 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ADD2P35612 726 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 NEDD9Q14511 834 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 SETDB1Q15047 1291 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 RBBP5Q15291 538 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ZC3H12AQ5D1E8 599 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 LUZP1Q86V48 1076 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 FCHSD1Q86WN1 690 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ABRAQ8N0Z2 381 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC34Q96HJ3 373 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 NAT10Q9H0A0 1025 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 SERPINA10Q9UK55 444 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 TRPC5Q9UL62 973 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 TOM1O60784 492 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 RPS6KA5O75582 802 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ADCY5O95622 1261 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MAGEA6P43360 314 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 NCBP1Q09161 790 aaKnown RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 RAD51AP2Q09MP3 1159 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 BRD3Q15059 726 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 E4F1Q66K89 784 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-204ENST00000503468 MED25Q71SY5 747 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 SESTD1Q86VW0 696 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 GIMAP7Q8NHV1 300 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 VWCEQ96DN2 955 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 ZMYND12Q9H0C1 365 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 NYAP2Q9P242 653 aa3.2□□□□□ -1.9
NEDD4-204ENST00000503468 LOC102724428A0A0B4J2F2 783 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 H0YHG0 523 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ENDOD1O94919 500 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 PSEN1P49768 467 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 SIK1P57059 783 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 DACT2Q5SW24 774 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 PPP4R3AQ6IN85 833 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 NBPF5PQ86XG9 351 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 DZIP3Q86Y13 1208 aaKnown RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 IRF2BP1Q8IU81 584 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 APLFQ8IW19 511 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 PLCD3Q8N3E9 789 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 SPATA18Q8TC71 538 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 HHIPQ96QV1 700 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 TSPAN18Q96SJ8 248 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 MAGEF1Q9HAY2 307 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms