RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 VCPKMTQ9H867 229 aa18.68■□□□□ 0.58
DDR1-248ENST00000503180 CNNM2Q9H8M5 875 aa18.68■□□□□ 0.58
DDR1-248ENST00000503180 SYNPO2Q9UMS6 1093 aa18.68■□□□□ 0.58
DDR1-248ENST00000503180 RAD21O60216 631 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 VCAM1P19320 739 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 TRDNQ13061 729 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 CCDC178Q5BJE1 867 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 CATSPERGQ6ZRH7 1159 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 ANO2Q9NQ90 1003 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 HOXC10Q9NYD6 342 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 CPA4Q9UI42 421 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 STX8Q9UNK0 236 aa18.67■□□□□ 0.58
DDR1-248ENST00000503180 COL13A1Q5TAT6 717 aaPredicted RBP18.66■□□□□ 0.58
DDR1-248ENST00000503180 TBC1D10CQ8IV04 446 aa18.66■□□□□ 0.58
DDR1-248ENST00000503180 GTF3C2Q8WUA4 911 aaPredicted RBP18.66■□□□□ 0.58
DDR1-248ENST00000503180 P2RX7Q99572 595 aaKnown RBP18.66■□□□□ 0.58
DDR1-248ENST00000503180 NBPF3Q9H094 633 aa18.66■□□□□ 0.58
DDR1-248ENST00000503180 RPAP3Q9H6T3 665 aaPredicted RBP18.66■□□□□ 0.58
DDR1-248ENST00000503180 TCP11L1Q9NUJ3 509 aa18.66■□□□□ 0.58
DDR1-248ENST00000503180 TACC3Q9Y6A5 838 aa18.66■□□□□ 0.58
DDR1-248ENST00000503180 PLIN4Q96Q06 1357 aa18.66■□□□□ 0.58
DDR1-248ENST00000503180 PTPRFP10586 1907 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 F5H6K3 240 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 WDR46O15213 610 aaKnown RBP18.65■□□□□ 0.58
DDR1-248ENST00000503180 KLRC3Q07444 240 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 COG2Q14746 738 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 IQCA1Q86XH1 822 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 TTC14Q96N46 770 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 TANGO6Q9C0B7 1094 aa18.65■□□□□ 0.58
DDR1-248ENST00000503180 RBM8AQ9Y5S9 174 aaKnown RBP18.65■□□□□ 0.58
DDR1-248ENST00000503180 BCRP11274 1271 aa18.64■□□□□ 0.57
DDR1-248ENST00000503180 HERVK_113P62684 666 aa18.64■□□□□ 0.57
DDR1-248ENST00000503180 CTU1Q7Z7A3 348 aaKnown RBP18.64■□□□□ 0.57
DDR1-248ENST00000503180 LSG1Q9H089 658 aaKnown RBP18.64■□□□□ 0.57
DDR1-248ENST00000503180 IL17RBQ9NRM6 502 aa18.64■□□□□ 0.57
DDR1-248ENST00000503180 CASP8AP2Q9UKL3 1982 aa18.64■□□□□ 0.57
DDR1-248ENST00000503180 KDM4AO75164 1064 aa18.63■□□□□ 0.57
DDR1-248ENST00000503180 GNRH1P01148 92 aa18.63■□□□□ 0.57
DDR1-248ENST00000503180 CYP21A2P08686 494 aa18.63■□□□□ 0.57
DDR1-248ENST00000503180 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
DDR1-248ENST00000503180 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
DDR1-248ENST00000503180 RNF20Q5VTR2 975 aa18.63■□□□□ 0.57
DDR1-248ENST00000503180 ANKRD13CQ8N6S4 541 aa18.63■□□□□ 0.57
DDR1-248ENST00000503180 CD99L2Q8TCZ2 262 aa18.63■□□□□ 0.57
DDR1-248ENST00000503180 ADGRA2Q96PE1 1338 aa18.63■□□□□ 0.57
DDR1-248ENST00000503180 NMT2O60551 498 aa18.62■□□□□ 0.57
DDR1-248ENST00000503180 FAM110CQ1W6H9 321 aa18.62■□□□□ 0.57
DDR1-248ENST00000503180 KIAA1755Q5JYT7 1200 aa18.62■□□□□ 0.57
DDR1-248ENST00000503180 RALYLQ86SE5 291 aaKnown RBP18.62■□□□□ 0.57
DDR1-248ENST00000503180 GMCL1P1Q8NEA9 526 aa18.62■□□□□ 0.57
DDR1-248ENST00000503180 EFCC1Q9HA90 598 aa18.62■□□□□ 0.57
DDR1-248ENST00000503180 ZSWIM5Q9P217 1185 aa18.62■□□□□ 0.57
DDR1-248ENST00000503180 LOC285556D6RIA3 1793 aa18.62■□□□□ 0.57
DDR1-248ENST00000503180 NEDD4P46934 1319 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 B4E1Z4 1266 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 FLOT1O75955 427 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 REC8O95072 547 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 FMNL1O95466 1100 aaPredicted RBP18.61■□□□□ 0.57
DDR1-248ENST00000503180 TOP1P11387 765 aaKnown RBP18.61■□□□□ 0.57
DDR1-248ENST00000503180 HOXD10P28358 340 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 DGKHQ86XP1 1220 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 CCAR1Q8IX12 1150 aaKnown RBP18.61■□□□□ 0.57
DDR1-248ENST00000503180 GPRC5AQ8NFJ5 357 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 NCOA7Q8NI08 942 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 RABGAP1Q9Y3P9 1069 aa18.61■□□□□ 0.57
DDR1-248ENST00000503180 E7EWF7 191 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 NDUFB10O96000 172 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 PSMC4P43686 418 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 NOVP48745 357 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 FCGRTP55899 365 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 NECTIN1Q15223 517 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 SLFN13Q68D06 897 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 LBX2Q6XYB7 198 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 TNS4Q8IZW8 715 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 LRRC47Q8N1G4 583 aaKnown RBP18.6■□□□□ 0.57
DDR1-248ENST00000503180 UBAC1Q9BSL1 405 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 MORF4L1Q9UBU8 362 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 TRIM17Q9Y577 477 aa18.6■□□□□ 0.57
DDR1-248ENST00000503180 MYPNQ86TC9 1320 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 EIF5BO60841 1220 aaKnown RBP18.59■□□□□ 0.57
DDR1-248ENST00000503180 BMP3P12645 472 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 DSG3P32926 999 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 CCNA1P78396 465 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 ZSCAN10Q96SZ4 725 aaPredicted RBP18.59■□□□□ 0.57
DDR1-248ENST00000503180 TMEM47Q9BQJ4 181 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 ZKSCAN3Q9BRR0 538 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 PAGR1Q9BTK6 254 aa18.59■□□□□ 0.57
DDR1-248ENST00000503180 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
DDR1-248ENST00000503180 ERICH2A1L162 156 aa18.58■□□□□ 0.56
DDR1-248ENST00000503180 SLC27A2O14975 620 aa18.58■□□□□ 0.56
DDR1-248ENST00000503180 ZKSCAN1P17029 563 aaPredicted RBP18.58■□□□□ 0.56
DDR1-248ENST00000503180 MCCP23508 829 aa18.58■□□□□ 0.56
DDR1-248ENST00000503180 SLC1A4P43007 532 aa18.58■□□□□ 0.56
DDR1-248ENST00000503180 PRMT2P55345 433 aa18.58■□□□□ 0.56
DDR1-248ENST00000503180 SART3Q15020 963 aaKnown RBP18.58■□□□□ 0.56
DDR1-248ENST00000503180 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms