RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 CLIP2Q9UDT6 1046 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 TMX2Q9Y320 296 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 TACC3Q9Y6A5 838 aa8.65□□□□□ -1.02
USP46-203ENST00000502443 LAMA4Q16363 1823 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 IGKV6D-41A0A0C4DH26 115 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 NMT2O60551 498 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 TTLL1O95922 423 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 BCRP11274 1271 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 PCP11498 1178 aaKnown RBP8.64□□□□□ -1.03
USP46-203ENST00000502443 GCLCP48506 637 aaPredicted RBP8.64□□□□□ -1.03
USP46-203ENST00000502443 HERVK_113P62684 666 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 LACTBP83111 547 aaPredicted RBP8.64□□□□□ -1.03
USP46-203ENST00000502443 PTH1RQ03431 593 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 ARHGEF6Q15052 776 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 KIAA1755Q5JYT7 1200 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 CASC1Q6TDU7 716 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 CATSPERGQ6ZRH7 1159 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 OTOP1Q7RTM1 612 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 TBC1D10CQ8IV04 446 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 LPAR1Q92633 364 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 P2RX7Q99572 595 aaKnown RBP8.64□□□□□ -1.03
USP46-203ENST00000502443 ESYT1Q9BSJ8 1104 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 TANGO6Q9C0B7 1094 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 MCOLN1Q9GZU1 580 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 VCPKMTQ9H867 229 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 EFCC1Q9HA90 598 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 MTMR4Q9NYA4 1195 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 STX8Q9UNK0 236 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 TRIM17Q9Y577 477 aa8.64□□□□□ -1.03
USP46-203ENST00000502443 PLIN4Q96Q06 1357 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 F5H6K3 240 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 CDC45O75419 566 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
USP46-203ENST00000502443 PSMC4P43686 418 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 CAP1Q01518 475 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 KLRC3Q07444 240 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 COG2Q14746 738 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 PKN2Q16513 984 aaKnown RBP8.63□□□□□ -1.03
USP46-203ENST00000502443 FAM110CQ1W6H9 321 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 PPP4R3BQ5MIZ7 849 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
USP46-203ENST00000502443 LRRC47Q8N1G4 583 aaKnown RBP8.63□□□□□ -1.03
USP46-203ENST00000502443 ESR2Q92731 530 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 MKL1Q969V6 931 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 ARHGAP39Q9C0H5 1083 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 IL17RBQ9NRM6 502 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 U3KPZ7 1027 aaPredicted RBP8.63□□□□□ -1.03
USP46-203ENST00000502443 ZSWIM8A7E2V4 1837 aa8.63□□□□□ -1.03
USP46-203ENST00000502443 MGAMO43451 1857 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 NEDD4P46934 1319 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 B4E1Z4 1266 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 WDR46O15213 610 aaKnown RBP8.62□□□□□ -1.03
USP46-203ENST00000502443 PEX10O60683 326 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 KDM4AO75164 1064 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 FLOT1O75955 427 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 FCGRTP55899 365 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 FAM83BQ5T0W9 1011 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 GPRC5AQ8NFJ5 357 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 GTF3C2Q8WUA4 911 aaPredicted RBP8.62□□□□□ -1.03
USP46-203ENST00000502443 MAP4K1Q92918 833 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 TRIM47Q96LD4 638 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 PAGR1Q9BTK6 254 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 TXNRD2Q9NNW7 524 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 HOXC10Q9NYD6 342 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 RBPJLQ9UBG7 517 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 SYNPO2Q9UMS6 1093 aa8.62□□□□□ -1.03
USP46-203ENST00000502443 SPDYE16A6NNV3 312 aaPredicted RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 TNPO2O14787 897 aaKnown RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 NDUFB10O96000 172 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 GNRH1P01148 92 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 CYP21A2P08686 494 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 HOXD10P28358 340 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 CTGFP29279 349 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 ERVK-24P63145 666 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 TRDNQ13061 729 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 FBXO46Q6PJ61 603 aaPredicted RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 IQCA1Q86XH1 822 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 CCAR1Q8IX12 1150 aaKnown RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 GMCL1P1Q8NEA9 526 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 NKX2-3Q8TAU0 364 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 CHMP4CQ96CF2 233 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 ABHD8Q96I13 439 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 NUP88Q99567 741 aaPredicted RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 ZKSCAN3Q9BRR0 538 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 KRT23Q9C075 422 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 LSG1Q9H089 658 aaKnown RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 CNNM2Q9H8M5 875 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 TCP11L1Q9NUJ3 509 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 MORF4L1Q9UBU8 362 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 ISY1Q9ULR0 285 aaKnown RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 PTPN22Q9Y2R2 807 aa8.61□□□□□ -1.03
USP46-203ENST00000502443 RBM8AQ9Y5S9 174 aaKnown RBP8.61□□□□□ -1.03
USP46-203ENST00000502443 RLFQ13129 1914 aa8.6□□□□□ -1.03
USP46-203ENST00000502443 PARP14Q460N5 1801 aa8.6□□□□□ -1.03
USP46-203ENST00000502443 MCCP23508 829 aa8.6□□□□□ -1.03
USP46-203ENST00000502443 DSG3P32926 999 aa8.6□□□□□ -1.03
USP46-203ENST00000502443 SLC1A4P43007 532 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms