RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 MFSD14BQ5SR56 506 aa16.62■□□□□ 0.25
NEAT1-201ENST00000499732 ZNF771Q7L3S4 317 aaPredicted RBP16.62■□□□□ 0.25
NEAT1-201ENST00000499732 VPS33BQ9H267 617 aa16.62■□□□□ 0.25
NEAT1-201ENST00000499732 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
NEAT1-201ENST00000499732 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
NEAT1-201ENST00000499732 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
NEAT1-201ENST00000499732 MROH7-TTC4A0A0A0MT08 1334 aa16.62■□□□□ 0.25
NEAT1-201ENST00000499732 MINDY4BA8MYZ0 360 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 LDHCP07864 332 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 SLFN14P0C7P3 912 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 RASSF7Q02833 373 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 FCHSD1Q86WN1 690 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
NEAT1-201ENST00000499732 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 SYKP43405 635 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 SYT10Q6XYQ8 523 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 SGMS1Q86VZ5 419 aa16.61■□□□□ 0.25
NEAT1-201ENST00000499732 DCP1AQ9NPI6 582 aaPredicted RBP16.61■□□□□ 0.25
NEAT1-201ENST00000499732 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.61■□□□□ 0.25
NEAT1-201ENST00000499732 V9GYY5 206 aaPredicted RBP16.61■□□□□ 0.25
NEAT1-201ENST00000499732 NAV1Q8NEY1 1877 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 LIFRP42702 1097 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 MYL5Q02045 173 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 TERF2Q15554 542 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
NEAT1-201ENST00000499732 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 SLF2Q8IX21 1173 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
NEAT1-201ENST00000499732 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 ATP8A2Q9NTI2 1148 aa16.6■□□□□ 0.25
NEAT1-201ENST00000499732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.254e-33■□□□□ 8.2
NEAT1-201ENST00000499732 BIN1O00499 593 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 WDHD1O75717 1129 aaPredicted RBP16.59■□□□□ 0.25
NEAT1-201ENST00000499732 ETF1P62495 437 aaKnown RBP16.59■□□□□ 0.25
NEAT1-201ENST00000499732 DIXDC1Q155Q3 683 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 AOC3Q16853 763 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 TMEM67Q5HYA8 995 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 ELOA2Q8IYF1 753 aaPredicted RBP16.59■□□□□ 0.25
NEAT1-201ENST00000499732 STK11IPQ8N1F8 1099 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 HSD3B7Q9H2F3 369 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 DBNDD1Q9H9R9 158 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 GLTPD2A6NH11 291 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 USP17L12C9JPN9 530 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 USP17L21D6R901 530 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 PPIP5K2O43314 1243 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 ECE2O60344 883 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 FGRP09769 529 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 FKBP1AP62942 108 aaKnown RBP16.59■□□□□ 0.25
NEAT1-201ENST00000499732 BMS1Q14692 1282 aaKnown RBP16.59■□□□□ 0.25
NEAT1-201ENST00000499732 STRIP1Q5VSL9 837 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 CPLX2Q6PUV4 134 aaKnown RBP16.59■□□□□ 0.25
NEAT1-201ENST00000499732 CERS3Q8IU89 383 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 MTA3Q9BTC8 594 aa16.59■□□□□ 0.25
NEAT1-201ENST00000499732 FER1L6Q2WGJ9 1857 aa16.58■□□□□ 0.24
NEAT1-201ENST00000499732 SCN9AQ15858 1988 aa16.58■□□□□ 0.24
NEAT1-201ENST00000499732 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
NEAT1-201ENST00000499732 LMOD1P29536 600 aaPredicted RBP16.58■□□□□ 0.24
NEAT1-201ENST00000499732 PPP4CP60510 307 aa16.58■□□□□ 0.24
NEAT1-201ENST00000499732 PTPAQ15257 358 aa16.58■□□□□ 0.24
NEAT1-201ENST00000499732 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
NEAT1-201ENST00000499732 FAM163AQ96GL9 167 aaPredicted RBP16.58■□□□□ 0.24
NEAT1-201ENST00000499732 ALG1Q9BT22 464 aa16.58■□□□□ 0.24
NEAT1-201ENST00000499732 BAG3O95817 575 aa16.57■□□□□ 0.24
NEAT1-201ENST00000499732 PCP11498 1178 aaKnown RBP16.57■□□□□ 0.24
NEAT1-201ENST00000499732 VEGFAP15692 232 aaPredicted RBP16.57■□□□□ 0.24
NEAT1-201ENST00000499732 METAP2P50579 478 aaKnown RBP eCLIP16.57■□□□□ 0.24
NEAT1-201ENST00000499732 UBASH3AP57075 661 aa16.57■□□□□ 0.24
NEAT1-201ENST00000499732 EVX2Q03828 476 aa16.57■□□□□ 0.24
NEAT1-201ENST00000499732 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
NEAT1-201ENST00000499732 RESP18Q5W5W9 173 aa16.57■□□□□ 0.24
NEAT1-201ENST00000499732 VSTM4Q8IW00 320 aa16.57■□□□□ 0.24
NEAT1-201ENST00000499732 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.57■□□□□ 0.24
NEAT1-201ENST00000499732 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
NEAT1-201ENST00000499732 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
NEAT1-201ENST00000499732 NID2Q14112 1375 aa16.57■□□□□ 0.24
NEAT1-201ENST00000499732 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
NEAT1-201ENST00000499732 NFKBIEO00221 500 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 CUTAO60888 179 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 ERCC6LQ2NKX8 1250 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 SHC4Q6S5L8 630 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 SH3RF3Q8TEJ3 882 aaPredicted RBP16.56■□□□□ 0.24
NEAT1-201ENST00000499732 ESR2Q92731 530 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 ZKSCAN3Q9BRR0 538 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
NEAT1-201ENST00000499732 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
NEAT1-201ENST00000499732 ARGLU1Q9NWB6 273 aaPredicted RBP16.56■□□□□ 0.24
NEAT1-201ENST00000499732 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.56■□□□□ 0.241e-323■□□□□ 10.2
NEAT1-201ENST00000499732 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 LTBP3Q9NS15 1303 aa16.56■□□□□ 0.24
NEAT1-201ENST00000499732 ZBTB43O43298 467 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms