RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CLDN10P78369 228 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 RASA3Q14644 834 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 TTF1Q15361 905 aaPredicted RBP10.27□□□□□ -0.77
FN1-227ENST00000498719 OTUD7BQ6GQQ9 843 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 BRINP3Q76B58 766 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
FN1-227ENST00000498719 ZNF654Q8IZM8 581 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 LILRB2Q8N423 598 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 AGXT2Q9BYV1 514 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 ZSCAN16Q9H4T2 348 aaPredicted RBP10.27□□□□□ -0.77
FN1-227ENST00000498719 GPR108Q9NPR9 543 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 TAGLN3Q9UI15 199 aa10.27□□□□□ -0.77
FN1-227ENST00000498719 PPP2R5AQ15172 486 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 CCDC57Q2TAC2 916 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 TRIM5Q9C035 493 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 CEP126Q9P2H0 1117 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 CFAP45Q9UL16 551 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 SLC45A1Q9Y2W3 748 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 SALL1Q9NSC2 1324 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 SHTN1A0MZ66 631 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 ERVV-2B6SEH9 535 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 OATP04181 439 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
FN1-227ENST00000498719 TRAPPC10P48553 1259 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 NR6A1Q15406 480 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 C11orf57Q6ZUT1 292 aaPredicted RBP10.26□□□□□ -0.77
FN1-227ENST00000498719 XAGE2Q96GT9 111 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
FN1-227ENST00000498719 GJB4Q9NTQ9 266 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 MYO5AQ9Y4I1 1855 aaKnown RBP10.26□□□□□ -0.77
FN1-227ENST00000498719 DCCP43146 1447 aa10.26□□□□□ -0.77
FN1-227ENST00000498719 A6NJY4 79 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 GTF2E1P29083 439 aaPredicted RBP10.25□□□□□ -0.77
FN1-227ENST00000498719 ZAP70P43403 619 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 TTC39AQ5SRH9 613 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 PUS7LQ9H0K6 701 aaKnown RBP10.25□□□□□ -0.77
FN1-227ENST00000498719 CLEC11AQ9Y240 323 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 SHANK3Q9BYB0 1731 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 COL5A2P05997 1499 aaPredicted RBP10.25□□□□□ -0.77
FN1-227ENST00000498719 CARMIL3Q8ND23 1372 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 SLC26A4O43511 780 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 IL2RBP14784 551 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 GJA8P48165 433 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
FN1-227ENST00000498719 DSC3Q14574 896 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 NAA16Q6N069 864 aaPredicted RBP10.25□□□□□ -0.77
FN1-227ENST00000498719 ERAP2Q6P179 960 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 E2F7Q96AV8 911 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 ISCA1Q9BUE6 129 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 RBCK1Q9BYM8 510 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 RCOR1Q9UKL0 485 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 DENND2AQ9ULE3 1009 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 ASAP1Q9ULH1 1129 aa10.25□□□□□ -0.77
FN1-227ENST00000498719 GOLGA6L6A8MZA4 724 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 CIAO1O76071 339 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 GPTP24298 496 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 ZNF75DP51815 510 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 HMGN5P82970 282 aaKnown RBP10.24□□□□□ -0.77
FN1-227ENST00000498719 TCIRG1Q13488 830 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 PLA2G4DQ86XP0 818 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 VPS37DQ86XT2 251 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
FN1-227ENST00000498719 TDRD7Q8NHU6 1098 aaKnown RBP10.24□□□□□ -0.77
FN1-227ENST00000498719 NKX2-3Q8TAU0 364 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 XIRP1Q702N8 1843 aaKnown RBP10.24□□□□□ -0.77
FN1-227ENST00000498719 PAPPAQ13219 1627 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 ME1P48163 572 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 TOMM20Q15388 145 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 CCDC158Q5M9N0 1113 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 ARMC3Q5W041 872 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 DNAJC10Q8IXB1 793 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 CCDC144CPQ8IYA2 1237 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 RSPH1Q8WYR4 309 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 MKL1Q969V6 931 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 ATP8A1Q9Y2Q0 1164 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 TOGARAM1Q9Y4F4 1720 aa10.24□□□□□ -0.77
FN1-227ENST00000498719 MYH7P12883 1935 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 POLR3DP05423 398 aaPredicted RBP10.23□□□□□ -0.77
FN1-227ENST00000498719 OGFOD1Q8N543 542 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 ZNF274Q96GC6 653 aaPredicted RBP10.23□□□□□ -0.77
FN1-227ENST00000498719 CYLDQ9NQC7 956 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 ATG3Q9NT62 314 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 PLEKHG2Q9H7P9 1386 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 AKAP11Q9UKA4 1901 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 FAM200BP0CF97 657 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 ARID5BQ14865 1188 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 IQCB1Q15051 598 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 HLFQ16534 295 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 Q3C1V9 767 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 GRAMD1BQ3KR37 738 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 ACBD5Q5T8D3 534 aaPredicted RBP10.23□□□□□ -0.77
FN1-227ENST00000498719 PRPF38BQ5VTL8 546 aaKnown RBP10.23□□□□□ -0.77
FN1-227ENST00000498719 ENGASEQ8NFI3 743 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 SYMPKQ92797 1274 aaKnown RBP10.23□□□□□ -0.77
FN1-227ENST00000498719 DEPDC7Q96QD5 511 aa10.23□□□□□ -0.77
FN1-227ENST00000498719 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms