RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 LTBP3Q9NS15 1303 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 MYH4Q9Y623 1939 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 SYCE3A1L190 88 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 BTBD18B2RXH4 712 aa20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 COL2A1P02458 1487 aaPredicted RBP20.57■□□□□ 0.88
CHRNA4-206ENST00000498043 SHTN1A0MZ66 631 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 XBP1P17861 261 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 PRELPP51888 382 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 GAS2L3Q86XJ1 694 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 BICD2Q8TD16 824 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 CSRNP1Q96S65 589 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 VEZTQ9HBM0 779 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 RCOR1Q9UKL0 485 aa20.56■□□□□ 0.88
CHRNA4-206ENST00000498043 FSD2A1L4K1 749 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 ZNF445P59923 1031 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 SHROOM1Q2M3G4 852 aaPredicted RBP20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 SPDYE2Q495Y8 402 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 PALM3A6NDB9 673 aaPredicted RBP20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 TTLL1O95922 423 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 SCG2P13521 617 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 GNAQP50148 359 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 NR5A1Q13285 461 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 TNIP1Q15025 636 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 USP17L2Q6R6M4 530 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 NOSTRINQ8IVI9 506 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 OXER1Q8TDS5 423 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 POLR3EQ9NVU0 708 aa20.55■□□□□ 0.88
CHRNA4-206ENST00000498043 PARP1P09874 1014 aaKnown RBP20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 LIG1P18858 919 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 STK38Q15208 465 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 PFKFB3Q16875 520 aaPredicted RBP20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 SLC35G1Q2M3R5 365 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 CCDC183Q5T5S1 534 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 PHF20Q9BVI0 1012 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 CPVLQ9H3G5 476 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 CLIP2Q9UDT6 1046 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 ME1P48163 572 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 ATP2B2Q01814 1243 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 CERKLQ49MI3 558 aaPredicted RBP20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 CCDC17Q96LX7 622 aa20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 FOXP1Q9H334 677 aaPredicted RBP20.54■□□□□ 0.88
CHRNA4-206ENST00000498043 CNTNAP1P78357 1384 aa20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 USP17L5A8MUK1 530 aa20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 KLRF2D3W0D1 207 aa20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 CYTH3O43739 400 aa20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 VEGFAP15692 232 aaPredicted RBP20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 NASPP49321 788 aaPredicted RBP20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 ANO1Q5XXA6 986 aa20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 LINC00301Q8NCQ3 95 aa20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 MYOZ2Q9NPC6 264 aa20.53■□□□□ 0.88
CHRNA4-206ENST00000498043 FRMPD2Q68DX3 1309 aaPredicted RBP20.52■□□□□ 0.88
CHRNA4-206ENST00000498043 GDF11O95390 407 aa20.52■□□□□ 0.88
CHRNA4-206ENST00000498043 PDHBP11177 359 aa20.52■□□□□ 0.88
CHRNA4-206ENST00000498043 TATDN1Q6P1N9 297 aa20.52■□□□□ 0.88
CHRNA4-206ENST00000498043 FOXP4Q8IVH2 680 aaPredicted RBP20.52■□□□□ 0.88
CHRNA4-206ENST00000498043 MTMR14Q8NCE2 650 aa20.52■□□□□ 0.88
CHRNA4-206ENST00000498043 GPKOWQ92917 476 aaPredicted RBP eCLIP20.52■□□□□ 0.88
CHRNA4-206ENST00000498043 YEATS4O95619 227 aa20.52■□□□□ 0.87
CHRNA4-206ENST00000498043 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.87
CHRNA4-206ENST00000498043 GJA3Q9Y6H8 435 aa20.52■□□□□ 0.87
CHRNA4-206ENST00000498043 WNT10BO00744 389 aa20.51■□□□□ 0.87
CHRNA4-206ENST00000498043 MYO1BO43795 1136 aa20.51■□□□□ 0.87
CHRNA4-206ENST00000498043 KRT2P35908 639 aa20.51■□□□□ 0.87
CHRNA4-206ENST00000498043 SF3A1Q15459 793 aaKnown RBP20.51■□□□□ 0.87
CHRNA4-206ENST00000498043 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
CHRNA4-206ENST00000498043 KCNG4Q8TDN1 519 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 FAM151AQ8WW52 585 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 ZBED3Q96IU2 234 aaPredicted RBP20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 FHDC1Q9C0D6 1143 aaPredicted RBP20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 SPTLC2O15270 562 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 EGFRP00533 1210 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 GMPSP49915 693 aaPredicted RBP20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 CDAN1Q8IWY9 1227 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 SPZ1Q9BXG8 430 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 TMEM39BQ9GZU3 492 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 DACT1Q9NYF0 836 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 ISY1Q9ULR0 285 aaKnown RBP20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 PCDHA7Q9UN72 937 aa20.5■□□□□ 0.87
CHRNA4-206ENST00000498043 ZNF541Q9H0D2 1346 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 FZD9O00144 591 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 RPS12P25398 132 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 SEPT2Q15019 361 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 NPY5RQ15761 445 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 RBM26Q5T8P6 1007 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 LRSAM1Q6UWE0 723 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 BRMS1Q9HCU9 246 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 FAM205CA6NFA0 338 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 NR1I2O75469 434 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 NLRP5P59047 1200 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 ABCB5Q2M3G0 1257 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 L1TD1Q5T7N2 865 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 HOMER1Q86YM7 354 aa20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 SCAF8Q9UPN6 1271 aaKnown RBP20.49■□□□□ 0.87
CHRNA4-206ENST00000498043 SNHG28P0DPA3 235 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 EEF2P13639 858 aaKnown RBP20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 ZNF280AP59817 542 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms