RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 PPP4R3AQ6IN85 833 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 NLRP14Q86W24 1093 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 GSPT2Q8IYD1 628 aaKnown RBP14.55□□□□□ -0.08
VEGFA-215ENST00000497139 NCOA7Q8NI08 942 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 MYCBPAPQ8TBZ2 947 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 GSDMAQ96QA5 445 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 GJB4Q9NTQ9 266 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 HDAC6Q9UBN7 1215 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 KRT9P35527 623 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 SLMAPQ14BN4 828 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 ZNF827Q17R98 1081 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 FUKQ8N0W3 1084 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 STK11IPQ8N1F8 1099 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 CCDC114Q96M63 670 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 CEP131Q9UPN4 1083 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 NWD2Q9ULI1 1742 aa14.55□□□□□ -0.08
VEGFA-215ENST00000497139 STK36Q9NRP7 1315 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 RNF113AO15541 343 aaKnown RBP14.54□□□□□ -0.08
VEGFA-215ENST00000497139 ANXA1P04083 346 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 RFX5P48382 616 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-215ENST00000497139 GLE1Q53GS7 698 aaKnown RBP14.54□□□□□ -0.08
VEGFA-215ENST00000497139 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-215ENST00000497139 ARMC9Q7Z3E5 817 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 OR8K1Q8NGG5 319 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 ARL8AQ96BM9 186 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 RSRC1Q96IZ7 334 aaKnown RBP14.54□□□□□ -0.08
VEGFA-215ENST00000497139 CCT8L2Q96SF2 557 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 DNAJC7Q99615 494 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 SH3GL3Q99963 347 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 DBNDD2Q9BQY9 259 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 PIK3C2AO00443 1686 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 ENC1O14682 589 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 N4BP3O15049 544 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 ZMYND10O75800 440 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 HOXC9P31274 260 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 NAIF1Q69YI7 327 aaPredicted RBP14.54□□□□□ -0.08
VEGFA-215ENST00000497139 KIAA1328Q86T90 577 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 MREGQ8N565 214 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 ARFGAP2Q8N6H7 521 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 PURBQ96QR8 312 aaKnown RBP14.54□□□□□ -0.08
VEGFA-215ENST00000497139 TSGA10Q9BZW7 698 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 RABEP2Q9H5N1 569 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 GPR108Q9NPR9 543 aa14.54□□□□□ -0.08
VEGFA-215ENST00000497139 HMGB1P1B2RPK0 211 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 PTPN12Q05209 780 aaKnown RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 RILPL1Q5EBL4 403 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 RALYLQ86SE5 291 aaKnown RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 NOSTRINQ8IVI9 506 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 CAPZA3Q96KX2 299 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 SPATS2LQ9NUQ6 558 aaKnown RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 AMOTL2Q9Y2J4 779 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 BTBD11A6QL63 1104 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 NR1D1P20393 614 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 MDH1P40925 334 aaKnown RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 NEXNQ0ZGT2 675 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 XRCC4Q13426 336 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 BIRC2Q13490 618 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 KRT31Q15323 416 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 TSR1Q2NL82 804 aaKnown RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 LACTB2Q53H82 288 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 HOMER3Q9NSC5 361 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 STIM2Q9P246 746 aa14.53□□□□□ -0.08
VEGFA-215ENST00000497139 SRPRBQ9Y5M8 271 aaKnown RBP14.53□□□□□ -0.08
VEGFA-215ENST00000497139 CHGBP05060 677 aa14.52□□□□□ -0.08
VEGFA-215ENST00000497139 CYLC1P35663 651 aaPredicted RBP14.52□□□□□ -0.08
VEGFA-215ENST00000497139 COPB1P53618 953 aaKnown RBP14.52□□□□□ -0.08
VEGFA-215ENST00000497139 HERVK_113P62684 666 aa14.52□□□□□ -0.08
VEGFA-215ENST00000497139 ADCY2Q08462 1091 aa14.52□□□□□ -0.08
VEGFA-215ENST00000497139 WASF1Q92558 559 aa14.52□□□□□ -0.08
VEGFA-215ENST00000497139 RRP36Q96EU6 259 aaKnown RBP14.52□□□□□ -0.08
VEGFA-215ENST00000497139 RNPC3Q96LT9 517 aaKnown RBP14.52□□□□□ -0.08
VEGFA-215ENST00000497139 CENPHQ9H3R5 247 aa14.52□□□□□ -0.08
VEGFA-215ENST00000497139 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.08
VEGFA-215ENST00000497139 SRGAP2O75044 1071 aa14.52□□□□□ -0.09
VEGFA-215ENST00000497139 METAP2P50579 478 aaKnown RBP eCLIP14.52□□□□□ -0.09
VEGFA-215ENST00000497139 IFT88Q13099 833 aa14.52□□□□□ -0.09
VEGFA-215ENST00000497139 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-215ENST00000497139 TTC19Q6DKK2 380 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-215ENST00000497139 SH3RF1Q7Z6J0 888 aa14.52□□□□□ -0.09
VEGFA-215ENST00000497139 CCDC170Q8IYT3 715 aa14.52□□□□□ -0.09
VEGFA-215ENST00000497139 KLHDC4Q8TBB5 520 aa14.52□□□□□ -0.09
VEGFA-215ENST00000497139 ZIM3Q96PE6 472 aa14.52□□□□□ -0.09
VEGFA-215ENST00000497139 A0A1W2PQC6 194 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 PPP1R3GB7ZBB8 358 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 PDE2AO00408 941 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 SSR1P43307 286 aaKnown RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 VAV2P52735 878 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 ANTXR2P58335 489 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 C2orf54Q08AI8 447 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 IQCKQ8N0W5 287 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 ZNF483Q8TF39 744 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 AIDAQ96BJ3 306 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 DDX21Q9NR30 783 aaKnown RBP eCLIP14.51□□□□□ -0.09
VEGFA-215ENST00000497139 SNX12Q9UMY4 172 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 A0A0G2JLW4 131 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 ANKRD18BA2A2Z9 1011 aa14.51□□□□□ -0.09
VEGFA-215ENST00000497139 NEURL1BA8MQ27 555 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms