RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GSTT1P30711 240 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 ARL4DP49703 201 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 USP11P51784 963 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 TBX4P57082 545 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 XPCQ01831 940 aaPredicted RBP3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 NFIAQ12857 509 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 TCEAL1Q15170 157 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 ZNF394Q53GI3 561 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 LRCH2Q5VUJ6 765 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 HSCBQ8IWL3 235 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 JMYQ8N9B5 988 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 RIN3Q8TB24 985 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 PMFBP1Q8TBY8 1022 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 SCYL1Q96KG9 808 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 TBC1D32Q96NH3 1257 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 PAGR1Q9BTK6 254 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 LRRC4CQ9HCJ2 640 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 PCDHA4Q9UN74 947 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 ERICH4A6NGS2 130 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 F13BP05160 661 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 SETSIPP0DME0 302 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 CRKP46108 304 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 ZNF252P-AS1Q0IIN9 211 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 IFT88Q13099 833 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 ALG1LQ6GMV1 187 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 KLHL10Q6JEL2 608 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 Q8N3U1 123 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 SHKBP1Q8TBC3 707 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 INO80BQ9C086 356 aaPredicted RBP3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 PIF1Q9H611 641 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 ZSWIM4Q9H7M6 989 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 OSGEPQ9NPF4 335 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 FAM8A1Q9UBU6 413 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 SUN2Q9UH99 717 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 PAXBP1Q9Y5B6 917 aa3.71□□□□□ -1.82
SNRNP48-202ENST00000496946 FAM95CA0A1B0GW59 222 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 FAM86C2PA6NEL3 165 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 DHX15O43143 795 aaKnown RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 CCP110O43303 1012 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 SORBS3O60504 671 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 IGHDP01880 384 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 S100BP04271 92 aaPredicted RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 EIF4BP23588 611 aaKnown RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 LRFN4Q6PJG9 635 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 FMNL3Q8IVF7 1028 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 ENOX1Q8TC92 643 aaKnown RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 CYP4F12Q9HCS2 524 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 BRMS1Q9HCU9 246 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 MED4Q9NPJ6 270 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 CHCHD3Q9NX63 227 aaKnown RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 TRAK1Q9UPV9 953 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 HIF3AQ9Y2N7 669 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC66A2RUB6 948 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 RNGTTO60942 597 aaKnown RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 CAPN2P17655 700 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 TFE3P19532 575 aaPredicted RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 KCNJ4P48050 445 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 GTF2A1P52655 376 aaPredicted RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 EVA1CP58658 441 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 DAB2P98082 770 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 WIPI1Q5MNZ9 446 aaPredicted RBP3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 ZSCAN30Q86W11 494 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 ANKRD13BQ86YJ7 626 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 ISL2Q96A47 359 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 MRS2Q9HD23 443 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 C1GALT1Q9NS00 363 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 KBTBD4Q9NVX7 518 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 PRKAG2Q9UGJ0 569 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 TCEAL9Q9UHQ7 104 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 TBX22Q9Y458 520 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 COL4A3BPQ9Y5P4 624 aa3.7□□□□□ -1.82
SNRNP48-202ENST00000496946 CECR2Q9BXF3 1484 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 CFAP65Q6ZU64 1925 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 TLR3O15455 904 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 KIF5CO60282 957 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 NBPF7P0C2Y1 421 aaPredicted RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 FSTP19883 344 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 RNF187Q5TA31 235 aaPredicted RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 LARP1BQ659C4 914 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 C16orf87Q6PH81 154 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 ALYREFQ86V81 257 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 ZDHHC13Q8IUH4 622 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 MAP4K3Q8IVH8 894 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 VPS37AQ8NEZ2 397 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC47Q96A33 483 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 ZBTB9Q96C00 473 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 SEZ6LQ9BYH1 1024 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 RETREG1Q9H6L5 497 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 UTP6Q9NYH9 597 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 AK5Q9Y6K8 562 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 DDX49Q9Y6V7 483 aaKnown RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 IL16Q14005 1332 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 PRR33A8MZF0 331 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 GOLGA6L22H0YM25 854 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 DNAJA2O60884 412 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 IGHA1P01876 353 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 U2AF1L5P0DN76 240 aaPredicted RBP3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 SKILP12757 684 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 KCNA2P16389 499 aa3.69□□□□□ -1.82
SNRNP48-202ENST00000496946 ITIH2P19823 946 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms