RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 RBAK-RBAKDNI3L0D1 243 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 BPNT1O95861 308 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 H2AFB1P0C5Y9 115 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 H2AFB2P0C5Z0 115 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 RAB6AP20340 208 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 HNRNPUQ00839 825 aaKnown RBP eCLIP5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 SDE2Q6IQ49 451 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 GPAT2Q6NUI2 795 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 TICAM2Q86XR7 235 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 MCF2L2Q86YR7 1114 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 MRPL41Q8IXM3 137 aaKnown RBP5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 NLGN1Q8N2Q7 840 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 ABHD8Q96I13 439 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 SEC16BQ96JE7 1060 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 FAM83CQ9BQN1 747 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 ANTXR1Q9H6X2 564 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 C7orf69Q9H7B7 122 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 PRDM16Q9HAZ2 1276 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 CAPN10Q9HC96 672 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 REV1Q9UBZ9 1251 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 PRKAG2Q9UGJ0 569 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 PPT2Q9UMR5 302 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 EFR3BQ9Y2G0 817 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 TBX22Q9Y458 520 aa5.09□□□□□ -1.59
EXOSC3-208ENST00000496910 DNMBPQ6XZF7 1577 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 ARHGEF40Q8TER5 1519 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 SPATA31A6Q5VVP1 1343 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 HMX2A2RU54 273 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 PLEKHD1A6NEE1 506 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 MSTNO14793 375 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 DHX15O43143 795 aaKnown RBP5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 SART1O43290 800 aaKnown RBP5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 GAS2O43903 313 aaKnown RBP5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 ADMP35318 185 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 COL9A2Q14055 689 aaPredicted RBP5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 BEND4Q6ZU67 534 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 CLEC10AQ8IUN9 316 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 MCATQ8IVS2 390 aaKnown RBP5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 RBBP8NLQ8NC74 664 aaPredicted RBP5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 ZNF507Q8TCN5 953 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 SHDQ96IW2 340 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 KLHL42Q9P2K6 505 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 RAXQ9Y2V3 346 aa5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 SUPT6HQ7KZ85 1726 aaKnown RBP5.08□□□□□ -1.6
EXOSC3-208ENST00000496910 PRDM2Q13029 1718 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 FAM95CA0A1B0GW59 222 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 DYRK3O43781 588 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 IGHA1P01876 353 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 PGRP06401 933 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 NASPP49321 788 aaPredicted RBP5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 GK5Q6ZS86 529 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 FAM214BQ7L5A3 538 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 HID1Q8IV36 788 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 PPP1R13LQ8WUF5 828 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 TMEM87BQ96K49 555 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 PCOLCE2Q9UKZ9 415 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 DAGLAQ9Y4D2 1042 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 TCOF1Q13428 1488 aaKnown RBP5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 WDR7Q9Y4E6 1490 aa5.07□□□□□ -1.6
EXOSC3-208ENST00000496910 PHLPP1O60346 1717 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 ROBO1Q9Y6N7 1651 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 SLC22A31A6NKX4 558 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 UPK3BL1B0FP48 263 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 UPK3BL2E5RIL1 263 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 CST3P01034 146 aaPredicted RBP5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 ACRP10323 421 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 PLCG1P19174 1290 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 GTF2F1P35269 517 aaKnown RBP eCLIP5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 GIPRP48546 466 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 ZNF165P49910 485 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 USP11P51784 963 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 ETF1P62495 437 aaKnown RBP5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 CDK5R2Q13319 367 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 PRAMEF13Q5VWM6 474 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 CDCP2Q5VXM1 449 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 OVOS1Q6IE37 1185 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 CCDC81Q6ZN84 652 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 ARMCX6Q7L4S7 300 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 LSRQ86X29 649 aaPredicted RBP5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 SLFN12Q8IYM2 578 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 FAM169BQ8N8A8 192 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 PIDD1Q9HB75 910 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 GMIPQ9P107 970 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 U3KQE9 123 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 ARHGEF12Q9NZN5 1544 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 SOGA1O94964 1423 aa5.06□□□□□ -1.6
EXOSC3-208ENST00000496910 CNTNAP4Q9C0A0 1308 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 TPD52L2O43399 206 aaKnown RBP5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 RNGTTO60942 597 aaKnown RBP5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 LEFTY1O75610 366 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 LRIG2O94898 1065 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 SLITRK5O94991 958 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 ATP2B1P20020 1258 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 PDE4BQ07343 736 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 MAP7Q14244 749 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 TCEAL1Q15170 157 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 PTPROQ16827 1216 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 RNF43Q68DV7 783 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 SLC6A19Q695T7 634 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms