RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 MKNK2Q9HBH9 465 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 AS3MTQ9HBK9 375 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 DDX4Q9NQI0 724 aaKnown RBP7.22□□□□□ -1.25
HMGCL-206ENST00000496907 PICK1Q9NRD5 415 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 ANAPC4Q9UJX5 808 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 PTCH2Q9Y6C5 1203 aa7.22□□□□□ -1.25
HMGCL-206ENST00000496907 A0A0D9SFI3 127 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 A0A1W2PPC1 479 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 DDTLA6NHG4 134 aaPredicted RBP7.21□□□□□ -1.26
HMGCL-206ENST00000496907 M0R2C6 588 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 LCE2BO14633 110 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 FGAP02671 866 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 PPATQ06203 517 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 TRDNQ13061 729 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 CERKLQ49MI3 558 aaPredicted RBP7.21□□□□□ -1.26
HMGCL-206ENST00000496907 NOL9Q5SY16 702 aaKnown RBP7.21□□□□□ -1.26
HMGCL-206ENST00000496907 TATDN1Q6P1N9 297 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 CTR9Q6PD62 1173 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 ERO1BQ86YB8 467 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 SH3TC2Q8TF17 1288 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 SDR42E1Q8WUS8 393 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 FAM227BQ96M60 508 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 GUCD1Q96NT3 240 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 ESYT1Q9BSJ8 1104 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 CNNM2Q9H8M5 875 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 PALD1Q9ULE6 856 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 BOLA1Q9Y3E2 137 aa7.21□□□□□ -1.26
HMGCL-206ENST00000496907 ZNF646O15015 1829 aaPredicted RBP7.2□□□□□ -1.26
HMGCL-206ENST00000496907 USP17L5A8MUK1 530 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 MINDY4BA8MYZ0 360 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 C19orf81C9J6K1 198 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 CXCL11O14625 94 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 PRKAB2O43741 272 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 ZKSCAN1P17029 563 aaPredicted RBP7.2□□□□□ -1.26
HMGCL-206ENST00000496907 MCCP23508 829 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 CAP2P40123 477 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 CAP1Q01518 475 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 GABPAQ06546 454 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 PPARAQ07869 468 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 KRT32Q14532 448 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 POTEEQ6S8J3 1075 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 MFSD6Q6ZSS7 791 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 C16orf86Q6ZW13 317 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 MIGA2Q7L4E1 593 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 ZFPM1Q8IX07 1006 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 SCYL3Q8IZE3 742 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.2□□□□□ -1.26
HMGCL-206ENST00000496907 MAP4K1Q92918 833 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 TTC14Q96N46 770 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 WRNIP1Q96S55 665 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 SEC62Q99442 399 aaKnown RBP7.2□□□□□ -1.26
HMGCL-206ENST00000496907 KRT23Q9C075 422 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 SH2D4AQ9H788 454 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 KANSL2Q9H9L4 492 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 SYNPO2Q9UMS6 1093 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 SYNGAP1Q96PV0 1343 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 SSC5DA1L4H1 1573 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 ZSWIM8A7E2V4 1837 aa7.2□□□□□ -1.26
HMGCL-206ENST00000496907 OTOFQ9HC10 1997 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 PHF20L1A8MW92 1017 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 HMGB1P09429 215 aaKnown RBP7.19□□□□□ -1.26
HMGCL-206ENST00000496907 FGRP09769 529 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 CDK8P49336 464 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 PLCD1P51178 756 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 GTF2A2P52657 109 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 USP14P54578 494 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 PLCB2Q00722 1185 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 PABPC4Q13310 644 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGCL-206ENST00000496907 TAF1CQ15572 869 aaPredicted RBP7.19□□□□□ -1.26
HMGCL-206ENST00000496907 ABCB5Q2M3G0 1257 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 AKNAD1Q5T1N1 836 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 TMEM179Q6ZVK1 233 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 SH3BP5LQ7L8J4 393 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 FASTKD5Q7L8L6 764 aaKnown RBP7.19□□□□□ -1.26
HMGCL-206ENST00000496907 ESR2Q92731 530 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 SYMPKQ92797 1274 aaKnown RBP7.19□□□□□ -1.26
HMGCL-206ENST00000496907 MTA3Q9BTC8 594 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 HTATIP2Q9BUP3 242 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 KRTAP4-6Q9BYQ5 205 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 ZCCHC17Q9NP64 241 aaKnown RBP7.19□□□□□ -1.26
HMGCL-206ENST00000496907 SAP30BPQ9UHR5 308 aaKnown RBP7.19□□□□□ -1.26
HMGCL-206ENST00000496907 NR2E3Q9Y5X4 410 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 ECM29Q5VYK3 1845 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 MUC6Q6W4X9 2439 aa7.19□□□□□ -1.26
HMGCL-206ENST00000496907 SPDYE5A6NIY4 337 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 ORC4O43929 436 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 TSPY3P0CV98 308 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 TSPY8P0CW00 308 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 CETPP11597 493 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 PPIL2Q13356 520 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 SNAPC2Q13487 334 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 KIF22Q14807 665 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 SART3Q15020 963 aaKnown RBP7.18□□□□□ -1.26
HMGCL-206ENST00000496907 TSGA10IPQ3SY00 556 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 SLFNL1Q499Z3 407 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.18□□□□□ -1.26
HMGCL-206ENST00000496907 ZNF589Q86UQ0 364 aaPredicted RBP7.18□□□□□ -1.26
HMGCL-206ENST00000496907 IQCA1Q86XH1 822 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms