RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 TANGO6Q9C0B7 1094 aa23.38■■□□□ 1.33
COL20A1-208ENST00000496810 TMX2Q9Y320 296 aa23.38■■□□□ 1.33
COL20A1-208ENST00000496810 GJB1P08034 283 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 EEF2P13639 858 aaKnown RBP23.37■■□□□ 1.33
COL20A1-208ENST00000496810 CYP2B6P20813 491 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 TDO2P48775 406 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 PRPF38BQ5VTL8 546 aaKnown RBP23.37■■□□□ 1.33
COL20A1-208ENST00000496810 GIMAP6Q6P9H5 292 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 GPR142Q7Z601 462 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 GTF3C2Q8WUA4 911 aaPredicted RBP23.37■■□□□ 1.33
COL20A1-208ENST00000496810 CCDC17Q96LX7 622 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 RABGAP1Q9Y3P9 1069 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
COL20A1-208ENST00000496810 FRMPD3Q5JV73 1810 aa23.37■■□□□ 1.33
COL20A1-208ENST00000496810 PRDM1O75626 825 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 APPP05067 770 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 GJA8P48165 433 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 ATP2B2Q01814 1243 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 LBX2Q6XYB7 198 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 VCPKMTQ9H867 229 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 ARHGEF10LQ9HCE6 1279 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 ZBTB47Q9UFB7 747 aaPredicted RBP23.36■■□□□ 1.33
COL20A1-208ENST00000496810 ZNF236Q9UL36 1845 aa23.36■■□□□ 1.33
COL20A1-208ENST00000496810 ALPK3Q96L96 1907 aa23.35■■□□□ 1.33
COL20A1-208ENST00000496810 RANBP2P49792 3224 aaKnown RBP23.35■■□□□ 1.33
COL20A1-208ENST00000496810 HMGCRP04035 888 aa23.35■■□□□ 1.33
COL20A1-208ENST00000496810 MAPK4P31152 587 aa23.35■■□□□ 1.33
COL20A1-208ENST00000496810 IFNL3Q8IZI9 196 aa23.35■■□□□ 1.33
COL20A1-208ENST00000496810 U2AF1L4Q8WU68 220 aaKnown RBP23.35■■□□□ 1.33
COL20A1-208ENST00000496810 USP6NLQ92738 828 aa23.35■■□□□ 1.33
COL20A1-208ENST00000496810 GNAT2P19087 354 aa23.34■■□□□ 1.33
COL20A1-208ENST00000496810 CCL14Q16627 93 aa23.34■■□□□ 1.33
COL20A1-208ENST00000496810 MORN1Q5T089 497 aa23.34■■□□□ 1.33
COL20A1-208ENST00000496810 VPS53Q5VIR6 699 aa23.34■■□□□ 1.33
COL20A1-208ENST00000496810 UBE2Q1Q7Z7E8 422 aa23.34■■□□□ 1.33
COL20A1-208ENST00000496810 DEFB118Q96PH6 123 aa23.34■■□□□ 1.33
COL20A1-208ENST00000496810 PAK6Q9NQU5 681 aaPredicted RBP23.34■■□□□ 1.33
COL20A1-208ENST00000496810 PATL2C9JE40 543 aaKnown RBP23.33■■□□□ 1.33
COL20A1-208ENST00000496810 IRX6P78412 446 aaPredicted RBP23.33■■□□□ 1.33
COL20A1-208ENST00000496810 AAMPQ13685 434 aa23.33■■□□□ 1.33
COL20A1-208ENST00000496810 LRRFIP1Q32MZ4 808 aaKnown RBP23.33■■□□□ 1.33
COL20A1-208ENST00000496810 PLEKHH3Q7Z736 793 aa23.33■■□□□ 1.33
COL20A1-208ENST00000496810 SOCS4Q8WXH5 440 aa23.33■■□□□ 1.33
COL20A1-208ENST00000496810 LPAR1Q92633 364 aa23.33■■□□□ 1.33
COL20A1-208ENST00000496810 ATG4CQ96DT6 458 aa23.33■■□□□ 1.33
COL20A1-208ENST00000496810 NUDT12Q9BQG2 462 aa23.33■■□□□ 1.33
COL20A1-208ENST00000496810 FBXO28Q9NVF7 368 aa23.33■■□□□ 1.33
COL20A1-208ENST00000496810 A0A0D9SFI3 127 aa23.32■■□□□ 1.32
COL20A1-208ENST00000496810 WDR78Q5VTH9 848 aa23.32■■□□□ 1.32
COL20A1-208ENST00000496810 SAMD1Q6SPF0 538 aaPredicted RBP23.32■■□□□ 1.32
COL20A1-208ENST00000496810 EVI5LQ96CN4 794 aa23.32■■□□□ 1.32
COL20A1-208ENST00000496810 FAM227BQ96M60 508 aa23.32■■□□□ 1.32
COL20A1-208ENST00000496810 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.32■■□□□ 1.32
COL20A1-208ENST00000496810 SH2D4AQ9H788 454 aa23.32■■□□□ 1.32
COL20A1-208ENST00000496810 KANSL2Q9H9L4 492 aa23.32■■□□□ 1.32
COL20A1-208ENST00000496810 FLOT1O75955 427 aa23.31■■□□□ 1.32
COL20A1-208ENST00000496810 COG2Q14746 738 aa23.31■■□□□ 1.32
COL20A1-208ENST00000496810 CCAR1Q8IX12 1150 aaKnown RBP23.31■■□□□ 1.32
COL20A1-208ENST00000496810 NUP88Q99567 741 aaPredicted RBP23.31■■□□□ 1.32
COL20A1-208ENST00000496810 RWDD1Q9H446 243 aaPredicted RBP23.31■■□□□ 1.32
COL20A1-208ENST00000496810 MKNK2Q9HBH9 465 aa23.31■■□□□ 1.32
COL20A1-208ENST00000496810 ZNFX1Q9P2E3 1918 aaKnown RBP23.31■■□□□ 1.32
COL20A1-208ENST00000496810 IGKV6D-41A0A0C4DH26 115 aa23.3■■□□□ 1.32
COL20A1-208ENST00000496810 WDR46O15213 610 aaKnown RBP23.3■■□□□ 1.32
COL20A1-208ENST00000496810 SGPL1O95470 568 aa23.3■■□□□ 1.32
COL20A1-208ENST00000496810 NUCB1Q02818 461 aa23.3■■□□□ 1.32
COL20A1-208ENST00000496810 CHD1LQ86WJ1 897 aa23.3■■□□□ 1.32
COL20A1-208ENST00000496810 MOV10L1Q9BXT6 1211 aaKnown RBP23.3■■□□□ 1.32
COL20A1-208ENST00000496810 NAPBQ9H115 298 aa23.3■■□□□ 1.32
COL20A1-208ENST00000496810 TACC3Q9Y6A5 838 aa23.3■■□□□ 1.32
COL20A1-208ENST00000496810 RAD21O60216 631 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 PRKAR2AP13861 404 aaKnown RBP23.29■■□□□ 1.32
COL20A1-208ENST00000496810 DSG3P32926 999 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 CCNA1P78396 465 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 PPARAQ07869 468 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 FAM83BQ5T0W9 1011 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 MAP3K21Q5TCX8 1036 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 DNAH12Q6ZR08 3092 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 NKX2-3Q8TAU0 364 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 APBA2Q99767 749 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 FLRT1Q9NZU1 646 aa23.29■■□□□ 1.32
COL20A1-208ENST00000496810 PLIN4Q96Q06 1357 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 FARP2O94887 1054 aaPredicted RBP23.28■■□□□ 1.32
COL20A1-208ENST00000496810 XRCC5P13010 732 aaKnown RBP23.28■■□□□ 1.32
COL20A1-208ENST00000496810 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
COL20A1-208ENST00000496810 PTPREP23469 700 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 RGS2P41220 211 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 MAP2K5Q13163 448 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 ZNF589Q86UQ0 364 aaPredicted RBP23.28■■□□□ 1.32
COL20A1-208ENST00000496810 PLEKHM2Q8IWE5 1019 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 CEP95Q96GE4 821 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 NACAP1Q9BZK3 213 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 SPATC1LQ9H0A9 340 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 CRISPLD2Q9H0B8 497 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 CWC22Q9HCG8 908 aaKnown RBP23.28■■□□□ 1.32
COL20A1-208ENST00000496810 INCENPQ9NQS7 918 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 LAMA4Q16363 1823 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 PLXNA1Q9UIW2 1896 aa23.28■■□□□ 1.32
COL20A1-208ENST00000496810 NMIQ13287 307 aaPredicted RBP23.27■■□□□ 1.32
COL20A1-208ENST00000496810 GRB14Q14449 540 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms