RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 VCAM1P19320 739 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 NDUFA8P51970 172 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 TNNC1P63316 161 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 MTRQ99707 1265 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 BLOC1S6Q9UL45 172 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 ZNF232Q9UNY5 417 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 GLI2P10070 1586 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 hCG_2014768A0A024R1R8 64 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 MYL1P05976 194 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 FAM200BP0CF97 657 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 FNTAP49354 379 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 RESTQ13127 1097 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 LONRF3Q496Y0 759 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 CFAP70Q5T0N1 1121 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 OLFML1Q6UWY5 402 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 DAAM2Q86T65 1068 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 SH2D3CQ8N5H7 860 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 SEC16BQ96JE7 1060 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 ATP6V1G3Q96LB4 118 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 IWS1Q96ST2 819 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 PCDHA7Q9UN72 937 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 PLCH2O75038 1416 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 TRAPPC8Q9Y2L5 1435 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 PTPDC1A2A3K4 754 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 JAK2O60674 1132 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 TRIM37O94972 964 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 CTNNA1P35221 906 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 KRT9P35527 623 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 PPARDQ03181 441 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 KCNV2Q8TDN2 545 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 STMN2Q93045 179 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 HIC2Q96JB3 615 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 CNOT10Q9H9A5 744 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 MRPL44Q9H9J2 332 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 ABCF2Q9UG63 623 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 MSH6P52701 1360 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 GUCY2FP51841 1108 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 KRT71Q3SY84 523 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 KBTBD12Q3ZCT8 623 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 DDX12PQ92771 950 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 RNPC3Q96LT9 517 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 LSG1Q9H089 658 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 C19orf44Q9H6X5 657 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 DLGAP2Q9P1A6 1054 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 MACROD2A1Z1Q3 448 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 TMEM232C9JQI7 657 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 GHRP10912 638 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 MARCKSP29966 332 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 PTPN21Q16825 1174 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 TMTC2Q8N394 836 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 TSPAN18Q96SJ8 248 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 NAP1L3Q99457 506 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 HINFPQ9BQA5 517 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 HELLSQ9NRZ9 838 aa9.06□□□□□ -0.96
CRNKL1-205ENST00000496549 PRC1O43663 620 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 CTNND1O60716 968 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 CHGBP05060 677 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 TCP1P17987 556 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ATP8B2P98198 1209 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 BLMHQ13867 455 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 SLC4A8Q2Y0W8 1093 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 CFAP157Q5JU67 520 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 C6orf163Q5TEZ5 329 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 Q6ZUG5 572 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 VSIG1Q86XK7 387 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 FNBP4Q8N3X1 1017 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ANKRD24Q8TF21 1146 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 LZTS2Q9BRK4 669 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 SENP3Q9H4L4 574 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ECHDC1Q9NTX5 307 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ABLIM1O14639 778 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 GSTA1P08263 222 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 RASSF2P50749 326 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 DNA2P51530 1060 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 DEUP1Q05D60 604 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 C2orf54Q08AI8 447 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ACCSLQ4AC99 568 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 MAP7D3Q8IWC1 876 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 RHPN1Q8TCX5 695 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 DNAAF2Q9NVR5 837 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 MIS18AQ9NYP9 233 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 LRRIQ1Q96JM4 1722 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 TCHHQ07283 1943 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 SUN1O94901 812 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 CDC25CP30307 473 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ELF3P78545 371 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 SF3A3Q12874 501 aaKnown RBP eCLIP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 BIRC3Q13489 604 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 TBC1D25Q3MII6 688 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 RALYLQ86SE5 291 aaKnown RBP9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 KLHDC4Q8TBB5 520 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ZFAND2BQ8WV99 257 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 GALNT8Q9NY28 637 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 LMCD1Q9NZU5 365 aa9.05□□□□□ -0.96
CRNKL1-205ENST00000496549 ATXN10Q9UBB4 475 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms