RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 USP17L11C9JVI0 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L18D6R9N7 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L22D6RA61 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L17D6RBQ6 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L19D6RCP7 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L20D6RJB6 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 RANBP6O60518 1105 aaKnown RBP9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 AKR1B1P15121 316 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 NT5C2P49902 561 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 LACTBP83111 547 aaPredicted RBP9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 FGD1P98174 961 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 USP17L24Q0WX57 530 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 MOGSQ13724 837 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 NECTIN1Q15223 517 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 TREML2Q5T2D2 321 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 C17orf99Q6UX52 265 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 LPAR1Q92633 364 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 C12orf42Q96LP6 360 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 JAKMIP1Q96N16 626 aaKnown RBP9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 R3HDMLQ9H3Y0 253 aa9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 RNF41Q9H4P4 317 aaPredicted RBP9.63□□□□□ -0.87
SMARCD3-215ENST00000496530 CCDC85CA6NKD9 419 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 E7EWF7 191 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 PRDM1O75626 825 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 CYP21A2P08686 494 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 PCP11498 1178 aaKnown RBP9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 PSMA5P28066 241 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 HSPA4P34932 840 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 PSMC4P43686 418 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 CCNA1P78396 465 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 FAM110CQ1W6H9 321 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 OTOP1Q7RTM1 612 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 RALYLQ86SE5 291 aaKnown RBP9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 RASEFQ8IZ41 740 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 ANKRD13CQ8N6S4 541 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 COA7Q96BR5 231 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 ABHD8Q96I13 439 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 NEK1Q96PY6 1258 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 TANGO6Q9C0B7 1094 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 ASCC2Q9H1I8 757 aaPredicted RBP9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 HOXC10Q9NYD6 342 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 NAP1L2Q9ULW6 460 aaPredicted RBP9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 TMX2Q9Y320 296 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 SNX14Q9Y5W7 946 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 CEP350Q5VT06 3117 aa9.62□□□□□ -0.87
SMARCD3-215ENST00000496530 SMIM22K7EJ46 135 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 TNPO2O14787 897 aaKnown RBP9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 WDR46O15213 610 aaKnown RBP9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 TTLL1O95922 423 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 BCRP11274 1271 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 EEF2P13639 858 aaKnown RBP9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 CPA1P15085 419 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 VCAM1P19320 739 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 RASA1P20936 1047 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 GUCY1A2P33402 732 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 NEK4P51957 841 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 HERVK_113P62684 666 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 JAG1P78504 1218 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 KRT32Q14532 448 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 SHROOM1Q2M3G4 852 aaPredicted RBP9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 AKNAD1Q5T1N1 836 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 CHST3Q7LGC8 479 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 RAET1EQ8TD07 263 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 RPAP3Q9H6T3 665 aaPredicted RBP9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 VCPKMTQ9H867 229 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 EMILIN3Q9NT22 766 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 NYAP2Q9P242 653 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 ANAPC4Q9UJX5 808 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 SYNPO2Q9UMS6 1093 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 PTPN22Q9Y2R2 807 aa9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 CTDP1Q9Y5B0 961 aaPredicted RBP9.61□□□□□ -0.87
SMARCD3-215ENST00000496530 ADGRA2Q96PE1 1338 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 FOXP2O15409 715 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 CASTP20810 708 aaKnown RBP9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 TFAP4Q01664 338 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 EVX2Q03828 476 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 COG2Q14746 738 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 ADCK5Q3MIX3 580 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 CCDC178Q5BJE1 867 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 FAM47AQ5JRC9 791 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 BLOC1S2Q6QNY1 142 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 CATSPERGQ6ZRH7 1159 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 GPRC5AQ8NFJ5 357 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 NEDD1Q8NHV4 660 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 ACER1Q8TDN7 264 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 CHMP4CQ96CF2 233 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 PAGR1Q9BTK6 254 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 KRT23Q9C075 422 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 CLIP2Q9UDT6 1046 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 ISY1Q9ULR0 285 aaKnown RBP9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 CYP46A1Q9Y6A2 500 aa9.6□□□□□ -0.87
SMARCD3-215ENST00000496530 MYPNQ86TC9 1320 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 B4E1Z4 1266 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 EPB41L2O43491 1005 aaKnown RBP9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 ORC4O43929 436 aa9.59□□□□□ -0.87
SMARCD3-215ENST00000496530 FLOT1O75955 427 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms