RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 ST3GAL1Q11201 340 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 MTMR2Q13614 643 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 GAS2L3Q86XJ1 694 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 HELLSQ9NRZ9 838 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 SRRDQ9UH36 339 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 LACTBP83111 547 aaPredicted RBP9.92□□□□□ -0.82
VPS13B-206ENST00000496144 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
VPS13B-206ENST00000496144 ATP8A2Q9NTI2 1148 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 FCER1AP12319 257 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 CERS5Q8N5B7 392 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 TMEM87AQ8NBN3 555 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS13B-206ENST00000496144 IDI2Q9BXS1 227 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 PRDM5Q9NQX1 630 aaPredicted RBP9.92□□□□□ -0.82
VPS13B-206ENST00000496144 ANKRD31Q8N7Z5 1873 aa9.92□□□□□ -0.82
VPS13B-206ENST00000496144 MBD4O95243 580 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 SLC25A27O95847 323 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 ARID4AP29374 1257 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-206ENST00000496144 MCMDC2Q4G0Z9 681 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 SH3RF3Q8TEJ3 882 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-206ENST00000496144 MMP19Q99542 508 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 GPR75-ASB3A0A0A6YYF3 556 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 CCL5P13501 91 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-206ENST00000496144 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-206ENST00000496144 CUL5Q93034 780 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 KANSL2Q9H9L4 492 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 IRF6O14896 467 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-206ENST00000496144 KBTBD3Q8NAB2 608 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 UBAC1Q9BSL1 405 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 U3KPZ7 1027 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-206ENST00000496144 TBC1D12O60347 775 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 RANBP6O60518 1105 aaKnown RBP9.91□□□□□ -0.82
VPS13B-206ENST00000496144 INPP5BP32019 993 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 CAP2P40123 477 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 ME3Q16798 604 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 IQCA1Q86XH1 822 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 FAM43AQ8N2R8 423 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
VPS13B-206ENST00000496144 CCDC88AQ3V6T2 1871 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 DICER1Q9UPY3 1922 aaKnown RBP9.9□□□□□ -0.82
VPS13B-206ENST00000496144 GJB2P29033 226 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 AKAP17AQ02040 695 aaKnown RBP9.9□□□□□ -0.82
VPS13B-206ENST00000496144 RNF180Q86T96 592 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 PTCH2Q9Y6C5 1203 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 RNF113AO15541 343 aaKnown RBP9.9□□□□□ -0.82
VPS13B-206ENST00000496144 FDX1P10109 184 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 TOB2Q14106 344 aaPredicted RBP9.9□□□□□ -0.82
VPS13B-206ENST00000496144 NFXL1Q6ZNB6 911 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 PANK2Q9BZ23 570 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 TPCN1Q9ULQ1 816 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 GH2P01242 217 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 CAVIN1Q6NZI2 390 aaKnown RBP9.9□□□□□ -0.82
VPS13B-206ENST00000496144 LPAR1Q92633 364 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 SMC3Q9UQE7 1217 aa9.9□□□□□ -0.82
VPS13B-206ENST00000496144 CCDC129Q6ZRS4 1044 aa9.9□□□□□ -0.83
VPS13B-206ENST00000496144 CCDC83Q8IWF9 413 aa9.9□□□□□ -0.83
VPS13B-206ENST00000496144 ANKRD35Q8N283 1001 aa9.9□□□□□ -0.83
VPS13B-206ENST00000496144 LARP6Q9BRS8 491 aaKnown RBP9.9□□□□□ -0.83
VPS13B-206ENST00000496144 KRT32Q14532 448 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 FAM110CQ1W6H9 321 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 BRI3BPQ8WY22 251 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 CHAMP1Q96JM3 812 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 ZBTB21Q9ULJ3 1066 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 RABGAP1Q9Y3P9 1069 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 AKAP11Q9UKA4 1901 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 STX6O43752 255 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 RARBP10826 455 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 APOBEC3HQ6NTF7 200 aaKnown RBP9.89□□□□□ -0.83
VPS13B-206ENST00000496144 FAM155AB1AL88 458 aaPredicted RBP9.89□□□□□ -0.83
VPS13B-206ENST00000496144 F13A1P00488 732 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 PTPRAP18433 802 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 BACE1P56817 501 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 ZMYM1Q5SVZ6 1142 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 DSCC1Q9BVC3 393 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 ARMT1Q9H993 441 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 NPM3O75607 178 aaKnown RBP9.89□□□□□ -0.83
VPS13B-206ENST00000496144 MBD3O95983 291 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 TAF6LQ9Y6J9 622 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 ZNF532Q9HCE3 1301 aa9.89□□□□□ -0.83
VPS13B-206ENST00000496144 EGFRP00533 1210 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 CHMP4BP1P59074 171 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 COG2Q14746 738 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 CCDC155Q8N6L0 562 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 FZD1Q9UP38 647 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 ECM29Q5VYK3 1845 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 M0R2C6 588 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 FGFR2P21802 821 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 IMMTQ16891 758 aaKnown RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 SEC62Q99442 399 aaKnown RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 C11orf49Q9H6J7 331 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 RPAP3Q9H6T3 665 aaPredicted RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 ADD3Q9UEY8 706 aaKnown RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 NCLP19338 710 aaKnown RBP9.88□□□□□ -0.83
VPS13B-206ENST00000496144 BLOC1S2Q6QNY1 142 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 DEFB118Q96PH6 123 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 CHGBP05060 677 aa9.88□□□□□ -0.83
VPS13B-206ENST00000496144 FAM160B2Q86V87 743 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms