RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 SPDYE2Q495Y8 402 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 METTL16Q86W50 562 aaKnown RBP18.93■□□□□ 0.62
HLA-A-208ENST00000496081 VPS54Q9P1Q0 977 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 FSD2A1L4K1 749 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 BTBD18B2RXH4 712 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 TCP10L2B9ZVM9 353 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 XBP1P17861 261 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 ZNF445P59923 1031 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 SAFBQ15424 915 aaKnown RBP eCLIP18.93■□□□□ 0.62
HLA-A-208ENST00000496081 TATDN1Q6P1N9 297 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 RASGRP2Q7LDG7 609 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 CLEC10AQ8IUN9 316 aa18.93■□□□□ 0.62
HLA-A-208ENST00000496081 DIS3L2Q8IYB7 885 aaKnown RBP18.93■□□□□ 0.62
HLA-A-208ENST00000496081 SYAP1Q96A49 352 aaPredicted RBP18.93■□□□□ 0.62
HLA-A-208ENST00000496081 ZBED3Q96IU2 234 aaPredicted RBP18.93■□□□□ 0.62
HLA-A-208ENST00000496081 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
HLA-A-208ENST00000496081 EIF6P56537 245 aaKnown RBP18.92■□□□□ 0.62
HLA-A-208ENST00000496081 SLC35G1Q2M3R5 365 aa18.92■□□□□ 0.62
HLA-A-208ENST00000496081 GAS2L3Q86XJ1 694 aa18.92■□□□□ 0.62
HLA-A-208ENST00000496081 PHF20Q9BVI0 1012 aa18.92■□□□□ 0.62
HLA-A-208ENST00000496081 POLR3EQ9NVU0 708 aa18.92■□□□□ 0.62
HLA-A-208ENST00000496081 CLIC4Q9Y696 253 aa18.92■□□□□ 0.62
HLA-A-208ENST00000496081 GOLGA6L4A6NEF3 574 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 TTLL1O95922 423 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 GOLGA8HP0CJ92 632 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 SCG2P13521 617 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 PFKFB3Q16875 520 aaPredicted RBP18.91■□□□□ 0.62
HLA-A-208ENST00000496081 NOSTRINQ8IVI9 506 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 LINC00301Q8NCQ3 95 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 FAM151AQ8WW52 585 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 TRIM34Q9BYJ4 488 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 FOXP1Q9H334 677 aaPredicted RBP18.91■□□□□ 0.62
HLA-A-208ENST00000496081 CLIP2Q9UDT6 1046 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 CNTNAP1P78357 1384 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 SHTN1A0MZ66 631 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 GOLGA6L3A6NEY3 463 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 KLRF2D3W0D1 207 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 CYTH3O43739 400 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 PARP1P09874 1014 aaKnown RBP18.91■□□□□ 0.62
HLA-A-208ENST00000496081 NASPP49321 788 aaPredicted RBP18.91■□□□□ 0.62
HLA-A-208ENST00000496081 CERKLQ49MI3 558 aaPredicted RBP18.91■□□□□ 0.62
HLA-A-208ENST00000496081 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 PIBF1Q8WXW3 757 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 CSRNP1Q96S65 589 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 LZTS2Q9BRK4 669 aa18.91■□□□□ 0.62
HLA-A-208ENST00000496081 FZD9O00144 591 aa18.9■□□□□ 0.62
HLA-A-208ENST00000496081 WNT10BO00744 389 aa18.9■□□□□ 0.62
HLA-A-208ENST00000496081 YEATS4O95619 227 aa18.9■□□□□ 0.62
HLA-A-208ENST00000496081 VEGFAP15692 232 aaPredicted RBP18.9■□□□□ 0.62
HLA-A-208ENST00000496081 RPS12P25398 132 aaKnown RBP18.9■□□□□ 0.62
HLA-A-208ENST00000496081 FKBP1CQ5VVH2 108 aa18.9■□□□□ 0.62
HLA-A-208ENST00000496081 ANO1Q5XXA6 986 aa18.9■□□□□ 0.62
HLA-A-208ENST00000496081 LRRC47Q8N1G4 583 aaKnown RBP18.9■□□□□ 0.62
HLA-A-208ENST00000496081 OXER1Q8TDS5 423 aa18.9■□□□□ 0.62
HLA-A-208ENST00000496081 MYOZ2Q9NPC6 264 aa18.9■□□□□ 0.62
HLA-A-208ENST00000496081 USP17L5A8MUK1 530 aa18.89■□□□□ 0.61
HLA-A-208ENST00000496081 PDHBP11177 359 aa18.89■□□□□ 0.61
HLA-A-208ENST00000496081 LIG1P18858 919 aa18.89■□□□□ 0.61
HLA-A-208ENST00000496081 NR5A1Q13285 461 aa18.89■□□□□ 0.61
HLA-A-208ENST00000496081 SHROOM1Q2M3G4 852 aaPredicted RBP18.89■□□□□ 0.61
HLA-A-208ENST00000496081 NBPF9Q3BBW0 867 aa18.89■□□□□ 0.61
HLA-A-208ENST00000496081 VEZTQ9HBM0 779 aa18.89■□□□□ 0.61
HLA-A-208ENST00000496081 MYH4Q9Y623 1939 aa18.89■□□□□ 0.61
HLA-A-208ENST00000496081 SYCE3A1L190 88 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 SNHG28P0DPA3 235 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 MMP14P50281 582 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 ZNF280AP59817 542 aaPredicted RBP18.88■□□□□ 0.61
HLA-A-208ENST00000496081 CCDC183Q5T5S1 534 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 SPZ1Q9BXG8 430 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
HLA-A-208ENST00000496081 MYO1BO43795 1136 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 SMARCA1P28370 1054 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 STK38Q15208 465 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 NPY5RQ15761 445 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 PPP4R3BQ5MIZ7 849 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 BICD2Q8TD16 824 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 CPVLQ9H3G5 476 aa18.88■□□□□ 0.61
HLA-A-208ENST00000496081 HERC5Q9UII4 1024 aaKnown RBP18.88■□□□□ 0.61
HLA-A-208ENST00000496081 YBX3P16989 372 aaKnown RBP eCLIP18.87■□□□□ 0.61
HLA-A-208ENST00000496081 KRT2P35908 639 aa18.87■□□□□ 0.61
HLA-A-208ENST00000496081 ME1P48163 572 aa18.87■□□□□ 0.61
HLA-A-208ENST00000496081 SF3A1Q15459 793 aaKnown RBP18.87■□□□□ 0.61
HLA-A-208ENST00000496081 FAM83AQ86UY5 434 aa18.87■□□□□ 0.61
HLA-A-208ENST00000496081 KCNG4Q8TDN1 519 aa18.87■□□□□ 0.61
HLA-A-208ENST00000496081 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
HLA-A-208ENST00000496081 PCDHA7Q9UN72 937 aa18.87■□□□□ 0.61
HLA-A-208ENST00000496081 SPTLC2O15270 562 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 GDF11O95390 407 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 GMPSP49915 693 aaPredicted RBP18.86■□□□□ 0.61
HLA-A-208ENST00000496081 TOB1P50616 345 aaPredicted RBP18.86■□□□□ 0.61
HLA-A-208ENST00000496081 RRP1BQ14684 758 aaKnown RBP18.86■□□□□ 0.61
HLA-A-208ENST00000496081 SLC39A14Q15043 492 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 ABCB5Q2M3G0 1257 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 DPF2Q92785 391 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 GPKOWQ92917 476 aaPredicted RBP eCLIP18.86■□□□□ 0.61
HLA-A-208ENST00000496081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.61
HLA-A-208ENST00000496081 SH3GLB2Q9NR46 395 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 GJA3Q9Y6H8 435 aa18.86■□□□□ 0.61
HLA-A-208ENST00000496081 FRMPD2Q68DX3 1309 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms