RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
GAPDH-210ENST00000496049 DGKHQ86XP1 1220 aa17.55■□□□□ 0.4
GAPDH-210ENST00000496049 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
GAPDH-210ENST00000496049 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
GAPDH-210ENST00000496049 LY9Q9HBG7 655 aa17.55■□□□□ 0.4
GAPDH-210ENST00000496049 SSC5DA1L4H1 1573 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 KLF18A0A0U1RQI7 1052 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 GOLGA8BA8MQT2 603 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 PPP1R12BO60237 982 aaPredicted RBP17.54■□□□□ 0.4
GAPDH-210ENST00000496049 GDF11O95390 407 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
GAPDH-210ENST00000496049 ASNSP08243 561 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 CATIPQ7Z7H3 387 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 SGMS1Q86VZ5 419 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 IGDCC4Q8TDY8 1250 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 TBC1D2Q9BYX2 928 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
GAPDH-210ENST00000496049 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 CTNND1O60716 968 aaKnown RBP17.53■□□□□ 0.4
GAPDH-210ENST00000496049 CD2BP2O95400 341 aaKnown RBP17.53■□□□□ 0.4
GAPDH-210ENST00000496049 TTLL1O95922 423 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 CALM1P0DP23 149 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 CALM2P0DP24 149 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 CALM3P0DP25 149 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 TM4SF4P48230 202 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 ICA1Q05084 483 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 APOBRQ0VD83 1088 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
GAPDH-210ENST00000496049 SEC23AQ15436 765 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 CEP95Q96GE4 821 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 KANSL2Q9H9L4 492 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 ZBTB21Q9ULJ3 1066 aa17.53■□□□□ 0.4
GAPDH-210ENST00000496049 ZBTB43O43298 467 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 NMT2O60551 498 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 DDAH1O94760 285 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 GH2P01242 217 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 TOP1P11387 765 aaKnown RBP17.52■□□□□ 0.4
GAPDH-210ENST00000496049 CAP2P40123 477 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 IREB2P48200 963 aaKnown RBP17.52■□□□□ 0.4
GAPDH-210ENST00000496049 RCAN1P53805 252 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 TTLL12Q14166 644 aaPredicted RBP17.52■□□□□ 0.4
GAPDH-210ENST00000496049 RAB3GAP1Q15042 981 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 NKX2-3Q8TAU0 364 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.4
GAPDH-210ENST00000496049 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.4
GAPDH-210ENST00000496049 SH2D4AQ9H788 454 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 ARHGEF10LQ9HCE6 1279 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 PICK1Q9NRD5 415 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 IL17RBQ9NRM6 502 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 TPCN1Q9ULQ1 816 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 MYH4Q9Y623 1939 aa17.52■□□□□ 0.4
GAPDH-210ENST00000496049 IGKV6D-41A0A0C4DH26 115 aa17.51■□□□□ 0.39
GAPDH-210ENST00000496049 EVCP57679 992 aa17.51■□□□□ 0.39
GAPDH-210ENST00000496049 APOA5Q6Q788 366 aa17.51■□□□□ 0.39
GAPDH-210ENST00000496049 ANKS1AQ92625 1134 aa17.51■□□□□ 0.39
GAPDH-210ENST00000496049 ARMC5Q96C12 935 aa17.51■□□□□ 0.39
GAPDH-210ENST00000496049 TMX3Q96JJ7 454 aa17.51■□□□□ 0.39
GAPDH-210ENST00000496049 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
GAPDH-210ENST00000496049 TMEM106CQ9BVX2 250 aa17.51■□□□□ 0.39
GAPDH-210ENST00000496049 OTOFQ9HC10 1997 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 PHF20L1A8MW92 1017 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 DHX16O60231 1041 aaKnown RBP17.5■□□□□ 0.39
GAPDH-210ENST00000496049 SLURP2P0DP57 97 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 METAP2P50579 478 aaKnown RBP eCLIP17.5■□□□□ 0.397e-43■■■■□ 23.5
GAPDH-210ENST00000496049 FKBP1BP68106 108 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 SREBF2Q12772 1141 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 SEPT2Q15019 361 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 ARMC9Q7Z3E5 817 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 SCYL3Q8IZE3 742 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 ZNF654Q8IZM8 581 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 GPHNQ9NQX3 736 aaPredicted RBP17.5■□□□□ 0.39
GAPDH-210ENST00000496049 ZNF112Q9UJU3 913 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 SYNPO2Q9UMS6 1093 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 PTPN22Q9Y2R2 807 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 CSADQ9Y600 493 aa17.5■□□□□ 0.39
GAPDH-210ENST00000496049 CCDC196A0A1B0GTZ2 297 aa17.49■□□□□ 0.39
GAPDH-210ENST00000496049 GOLGA8AA7E2F4 631 aa17.49■□□□□ 0.39
GAPDH-210ENST00000496049 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
GAPDH-210ENST00000496049 PNMA1Q8ND90 353 aa17.49■□□□□ 0.39
GAPDH-210ENST00000496049 LARP6Q9BRS8 491 aaKnown RBP17.49■□□□□ 0.39
GAPDH-210ENST00000496049 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.49■□□□□ 0.39
GAPDH-210ENST00000496049 AS3MTQ9HBK9 375 aa17.49■□□□□ 0.39
GAPDH-210ENST00000496049 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
GAPDH-210ENST00000496049 NID2Q14112 1375 aa17.49■□□□□ 0.39
GAPDH-210ENST00000496049 PFKFB2O60825 505 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
GAPDH-210ENST00000496049 KIF5BP33176 963 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 NOVP48745 357 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 STK3Q13188 491 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 PRKG1Q13976 671 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 PPP2R5BQ15173 497 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 ME3Q16798 604 aa17.48■□□□□ 0.39
GAPDH-210ENST00000496049 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
GAPDH-210ENST00000496049 RCSD1Q6JBY9 416 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms