RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 TIE1P35590 1138 aa14.73□□□□□ -0.05
MRPL55-233ENST00000495899 PDE4BQ07343 736 aa14.73□□□□□ -0.05
MRPL55-233ENST00000495899 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
MRPL55-233ENST00000495899 ACER1Q8TDN7 264 aa14.73□□□□□ -0.05
MRPL55-233ENST00000495899 ARHGEF10LQ9HCE6 1279 aa14.73□□□□□ -0.05
MRPL55-233ENST00000495899 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
MRPL55-233ENST00000495899 TRIM17Q9Y577 477 aa14.73□□□□□ -0.05
MRPL55-233ENST00000495899 CCDC171Q6TFL3 1326 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 A0A1W2PRG0 241 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L15C9J2P7 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L13C9JLJ4 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L11C9JVI0 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L18D6R9N7 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L22D6RA61 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L17D6RBQ6 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L19D6RCP7 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L20D6RJB6 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 HSPD1P10809 573 aaKnown RBP14.72□□□□□ -0.05
MRPL55-233ENST00000495899 PRMT2P55345 433 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 IRX3P78415 501 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-233ENST00000495899 PPARAQ07869 468 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 USP17L24Q0WX57 530 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 VPS53Q5VIR6 699 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 SIAH1Q8IUQ4 282 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 GTF3C2Q8WUA4 911 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-233ENST00000495899 PTPN22Q9Y2R2 807 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 TMX2Q9Y320 296 aa14.72□□□□□ -0.05
MRPL55-233ENST00000495899 ZMYM6O95789 1325 aa14.71□□□□□ -0.05
MRPL55-233ENST00000495899 TULP1O00294 542 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-233ENST00000495899 FGAP02671 866 aa14.71□□□□□ -0.05
MRPL55-233ENST00000495899 NEFLP07196 543 aa14.71□□□□□ -0.05
MRPL55-233ENST00000495899 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-233ENST00000495899 GSPT1P15170 499 aaKnown RBP14.71□□□□□ -0.05
MRPL55-233ENST00000495899 HOXD10P28358 340 aa14.71□□□□□ -0.05
MRPL55-233ENST00000495899 ICA1Q05084 483 aa14.71□□□□□ -0.05
MRPL55-233ENST00000495899 CWC27Q6UX04 472 aaKnown RBP14.71□□□□□ -0.05
MRPL55-233ENST00000495899 ZNF589Q86UQ0 364 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-233ENST00000495899 EFCAB3Q8N7B9 438 aa14.71□□□□□ -0.05
MRPL55-233ENST00000495899 LPAR1Q92633 364 aa14.71□□□□□ -0.05
MRPL55-233ENST00000495899 ATAD5Q96QE3 1844 aa14.71□□□□□ -0.06
MRPL55-233ENST00000495899 EEF2P13639 858 aaKnown RBP14.7□□□□□ -0.06
MRPL55-233ENST00000495899 VCAM1P19320 739 aa14.7□□□□□ -0.06
MRPL55-233ENST00000495899 PSMC4P43686 418 aa14.7□□□□□ -0.06
MRPL55-233ENST00000495899 ZYXQ15942 572 aaKnown RBP14.7□□□□□ -0.06
MRPL55-233ENST00000495899 FAM110CQ1W6H9 321 aa14.7□□□□□ -0.06
MRPL55-233ENST00000495899 CATSPERGQ6ZRH7 1159 aa14.7□□□□□ -0.06
MRPL55-233ENST00000495899 ANKRD13CQ8N6S4 541 aa14.7□□□□□ -0.06
MRPL55-233ENST00000495899 P2RX7Q99572 595 aaKnown RBP14.7□□□□□ -0.06
MRPL55-233ENST00000495899 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.7□□□□□ -0.06
MRPL55-233ENST00000495899 NYAP2Q9P242 653 aa14.7□□□□□ -0.06
MRPL55-233ENST00000495899 HPS5Q9UPZ3 1129 aa14.7□□□□□ -0.06
MRPL55-233ENST00000495899 FMNL1O95466 1100 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-233ENST00000495899 FGRP09769 529 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 FCGRTP55899 365 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 HERVK_113P62684 666 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 CAP1Q01518 475 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 STK11IPQ8N1F8 1099 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 NEDD1Q8NHV4 660 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 CCDC136Q96JN2 1154 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 TRIM47Q96LD4 638 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 ARHGAP39Q9C0H5 1083 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 VCPKMTQ9H867 229 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 MORF4L1Q9UBU8 362 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 SYNPO2Q9UMS6 1093 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 LOC285556D6RIA3 1793 aa14.69□□□□□ -0.06
MRPL55-233ENST00000495899 IGKV6D-41A0A0C4DH26 115 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 PRDM1O75626 825 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 PCP11498 1178 aaKnown RBP14.68□□□□□ -0.06
MRPL55-233ENST00000495899 PPP4R3BQ5MIZ7 849 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 LBX2Q6XYB7 198 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 GPRC5AQ8NFJ5 357 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 RUFY2Q8WXA3 655 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 MKL1Q969V6 931 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 RPAP3Q9H6T3 665 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-233ENST00000495899 GOPCQ9HD26 462 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 HOXC10Q9NYD6 342 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.68□□□□□ -0.06
MRPL55-233ENST00000495899 PTPRFP10586 1907 aa14.68□□□□□ -0.06
MRPL55-233ENST00000495899 BAZ2AQ9UIF9 1905 aaKnown RBP14.68□□□□□ -0.06
MRPL55-233ENST00000495899 CCDC85CA6NKD9 419 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 TTLL13PA6NNM8 815 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 ORC4O43929 436 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 TSPY3P0CV98 308 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 TSPY8P0CW00 308 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 CTGFP29279 349 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 NT5C2P49902 561 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 TFAP4Q01664 338 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 ATP2B2Q01814 1243 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 CTDSPL2Q05D32 466 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 COG2Q14746 738 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 CLEC10AQ8IUN9 316 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 DSCC1Q9BVC3 393 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 MFRPQ9BY79 579 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 MTMR4Q9NYA4 1195 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 RBPJLQ9UBG7 517 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 SRRDQ9UH36 339 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 RABGAP1Q9Y3P9 1069 aa14.67□□□□□ -0.06
MRPL55-233ENST00000495899 RAD50Q92878 1312 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms