RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 A0A1W2PQY0 241 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 STRNO43815 780 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 ARID4AP29374 1257 aaPredicted RBP13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 USP14P54578 494 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 PPP4CP60510 307 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 FAAP100Q0VG06 881 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 TFCP2Q12800 502 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 C16orf59Q7L2K0 433 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 ADGRA1Q86SQ6 560 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 IL27Q8NEV9 243 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 PARP14Q460N5 1801 aa13.91□□□□□ -0.18
HLA-DOA-206ENST00000495532 BAG3O95817 575 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 BMP1P13497 986 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 PLCG2P16885 1265 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 MCAMP43121 646 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 TATDN1Q6P1N9 297 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 ANKRD33Q7Z3H0 272 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 ACER1Q8TDN7 264 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 SSH1Q8WYL5 1049 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 TOX2Q96NM4 488 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 NOL10Q9BSC4 688 aaKnown RBP13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 RPAP3Q9H6T3 665 aaPredicted RBP13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 CXXC1Q9P0U4 656 aaPredicted RBP13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 LRP2BPQ9P2M1 347 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 SAP30BPQ9UHR5 308 aaKnown RBP13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 HCN4Q9Y3Q4 1203 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 ROBO3Q96MS0 1386 aa13.9□□□□□ -0.18
HLA-DOA-206ENST00000495532 PGK1P00558 417 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 TIMP1P01033 207 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 ERCC3P19447 782 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 TMEM240Q5SV17 173 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 CCDC129Q6ZRS4 1044 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 MAML3Q96JK9 1138 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 SPATC1LQ9H0A9 340 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
HLA-DOA-206ENST00000495532 COL11A1P12107 1806 aaPredicted RBP13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 HLA-DOAP06340 250 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 RARBP10826 455 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 IGFBP4P22692 258 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 RAB3GAP1Q15042 981 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 NAA16Q6N069 864 aaPredicted RBP13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 RNF180Q86T96 592 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
HLA-DOA-206ENST00000495532 DCDC2CA8MYV0 355 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 ADAMTS4O75173 837 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 TFF2Q03403 129 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 ABRAQ8N0Z2 381 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 LENG1Q96BZ8 264 aaPredicted RBP13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 NRBP1Q9UHY1 535 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 PRRC2BQ5JSZ5 2229 aaKnown RBP13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 LRRC37A2A6NM11 1700 aa13.87□□□□□ -0.19
HLA-DOA-206ENST00000495532 KCNQ1P51787 676 aa13.86□□□□□ -0.19
HLA-DOA-206ENST00000495532 PPIGQ13427 754 aaKnown RBP eCLIP13.86□□□□□ -0.19
HLA-DOA-206ENST00000495532 COG2Q14746 738 aa13.86□□□□□ -0.19
HLA-DOA-206ENST00000495532 CSF2RAP15509 400 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 TAL1P17542 331 aaPredicted RBP13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 GUCY1A2P33402 732 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 DYNLL1P63167 89 aaKnown RBP13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 RAB30Q15771 203 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 ABCB5Q2M3G0 1257 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 EHD4Q9H223 541 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 NKX2-4Q9H2Z4 354 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 MROH8Q9H579 483 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 STARD7Q9NQZ5 370 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 HOXC10Q9NYD6 342 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 YBX2Q9Y2T7 364 aaKnown RBP13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 ZNF521Q96K83 1311 aa13.85□□□□□ -0.19
HLA-DOA-206ENST00000495532 UQCRFS1P1P0C7P4 283 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 ZNF865P0CJ78 1059 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 ACRP10323 421 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 ACLYP53396 1101 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 CERKLQ49MI3 558 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 PSRC1Q6PGN9 363 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 CCDC174Q6PII3 467 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 MEIS3Q99687 375 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 TSEN34Q9BSV6 310 aaKnown RBP13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 SNRKQ9NRH2 765 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 MSRAQ9UJ68 235 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 TRANK1O15050 2925 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 SYNRGQ9UMZ2 1314 aa13.84□□□□□ -0.19
HLA-DOA-206ENST00000495532 NAV1Q8NEY1 1877 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 A0A1W2PRG0 241 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 SRGAP3O43295 1099 aa13.83□□□□□ -0.2
HLA-DOA-206ENST00000495532 AKR1A1P14550 325 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms