RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 ELNP15502 786 aa21.46■■□□□ 1.03
COL20A1-207ENST00000494913 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
COL20A1-207ENST00000494913 SPICE1Q8N0Z3 855 aa21.46■■□□□ 1.03
COL20A1-207ENST00000494913 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL20A1-207ENST00000494913 TANGO6Q9C0B7 1094 aa21.46■■□□□ 1.03
COL20A1-207ENST00000494913 HELLSQ9NRZ9 838 aa21.46■■□□□ 1.03
COL20A1-207ENST00000494913 RABGAP1Q9Y3P9 1069 aa21.46■■□□□ 1.03
COL20A1-207ENST00000494913 PRDM1O75626 825 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 PXYLP1Q8TE99 480 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 LPAR1Q92633 364 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 FAM227BQ96M60 508 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 OSBPL3Q9H4L5 887 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 VCPKMTQ9H867 229 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 ZNF287Q9HBT7 754 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 GJD2Q9UKL4 321 aa21.45■■□□□ 1.03
COL20A1-207ENST00000494913 CNMDO75829 334 aa21.45■■□□□ 1.02
COL20A1-207ENST00000494913 UBXN2AP68543 259 aa21.45■■□□□ 1.02
COL20A1-207ENST00000494913 COG2Q14746 738 aa21.45■■□□□ 1.02
COL20A1-207ENST00000494913 TICAM2Q86XR7 235 aa21.45■■□□□ 1.02
COL20A1-207ENST00000494913 ZNF444Q8N0Y2 327 aaPredicted RBP21.45■■□□□ 1.02
COL20A1-207ENST00000494913 PORCNQ9H237 461 aa21.45■■□□□ 1.02
COL20A1-207ENST00000494913 HOXC10Q9NYD6 342 aa21.45■■□□□ 1.02
COL20A1-207ENST00000494913 MKI67P46013 3256 aaKnown RBP21.44■■□□□ 1.02
COL20A1-207ENST00000494913 SPDYE16A6NNV3 312 aaPredicted RBP21.44■■□□□ 1.02
COL20A1-207ENST00000494913 FOXP2O15409 715 aa21.44■■□□□ 1.02
COL20A1-207ENST00000494913 MAPK4P31152 587 aa21.44■■□□□ 1.02
COL20A1-207ENST00000494913 PPARAQ07869 468 aa21.44■■□□□ 1.02
COL20A1-207ENST00000494913 LBX2Q6XYB7 198 aa21.44■■□□□ 1.02
COL20A1-207ENST00000494913 A0A0D9SFI3 127 aa21.43■■□□□ 1.02
COL20A1-207ENST00000494913 SLC3A2P08195 630 aaKnown RBP21.43■■□□□ 1.02
COL20A1-207ENST00000494913 CCL5P13501 91 aa21.43■■□□□ 1.02
COL20A1-207ENST00000494913 CCNA1P78396 465 aa21.43■■□□□ 1.02
COL20A1-207ENST00000494913 MCMDC2Q4G0Z9 681 aa21.43■■□□□ 1.02
COL20A1-207ENST00000494913 VPS53Q5VIR6 699 aa21.43■■□□□ 1.02
COL20A1-207ENST00000494913 BTBD7Q9P203 1132 aa21.43■■□□□ 1.02
COL20A1-207ENST00000494913 RAD21O60216 631 aa21.42■■□□□ 1.02
COL20A1-207ENST00000494913 PDE4BQ07343 736 aa21.42■■□□□ 1.02
COL20A1-207ENST00000494913 NMIQ13287 307 aaPredicted RBP21.42■■□□□ 1.02
COL20A1-207ENST00000494913 RNF208Q9H0X6 261 aa21.42■■□□□ 1.02
COL20A1-207ENST00000494913 CWC22Q9HCG8 908 aaKnown RBP21.42■■□□□ 1.02
COL20A1-207ENST00000494913 GOPCQ9HD26 462 aa21.42■■□□□ 1.02
COL20A1-207ENST00000494913 PDE4DIPQ5VU43 2346 aa21.41■■□□□ 1.02
COL20A1-207ENST00000494913 FLOT1O75955 427 aa21.41■■□□□ 1.02
COL20A1-207ENST00000494913 INHAP05111 366 aa21.41■■□□□ 1.02
COL20A1-207ENST00000494913 GPR142Q7Z601 462 aa21.41■■□□□ 1.02
COL20A1-207ENST00000494913 PLEKHH3Q7Z736 793 aa21.41■■□□□ 1.02
COL20A1-207ENST00000494913 NUDT12Q9BQG2 462 aa21.41■■□□□ 1.02
COL20A1-207ENST00000494913 RBBP6Q7Z6E9 1792 aaKnown RBP21.41■■□□□ 1.02
COL20A1-207ENST00000494913 WDR46O15213 610 aaKnown RBP21.4■■□□□ 1.02
COL20A1-207ENST00000494913 CYP2B6P20813 491 aa21.4■■□□□ 1.02
COL20A1-207ENST00000494913 WDR78Q5VTH9 848 aa21.4■■□□□ 1.02
COL20A1-207ENST00000494913 SAMD1Q6SPF0 538 aaPredicted RBP21.4■■□□□ 1.02
COL20A1-207ENST00000494913 UNC93B1Q9H1C4 597 aa21.4■■□□□ 1.02
COL20A1-207ENST00000494913 NYAP2Q9P242 653 aa21.4■■□□□ 1.02
COL20A1-207ENST00000494913 SDSP20132 328 aa21.39■■□□□ 1.02
COL20A1-207ENST00000494913 DSG3P32926 999 aa21.39■■□□□ 1.02
COL20A1-207ENST00000494913 CTDSPL2Q05D32 466 aa21.39■■□□□ 1.02
COL20A1-207ENST00000494913 CLIP2Q9UDT6 1046 aa21.39■■□□□ 1.02
COL20A1-207ENST00000494913 IGKV6D-41A0A0C4DH26 115 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 GJB1P08034 283 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 TSPY3P0CV98 308 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 TSPY8P0CW00 308 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 ALX1Q15699 326 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 FAM47AQ5JRC9 791 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 ZNF589Q86UQ0 364 aaPredicted RBP21.39■■□□□ 1.01
COL20A1-207ENST00000494913 SOCS4Q8WXH5 440 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 INCENPQ9NQS7 918 aa21.39■■□□□ 1.01
COL20A1-207ENST00000494913 FGAP02671 866 aa21.38■■□□□ 1.01
COL20A1-207ENST00000494913 HMGCRP04035 888 aa21.38■■□□□ 1.01
COL20A1-207ENST00000494913 TFAP4Q01664 338 aa21.38■■□□□ 1.01
COL20A1-207ENST00000494913 MORN1Q5T089 497 aa21.38■■□□□ 1.01
COL20A1-207ENST00000494913 ATG4CQ96DT6 458 aa21.38■■□□□ 1.01
COL20A1-207ENST00000494913 CEP95Q96GE4 821 aa21.38■■□□□ 1.01
COL20A1-207ENST00000494913 MTMR4Q9NYA4 1195 aa21.38■■□□□ 1.01
COL20A1-207ENST00000494913 GREB1LQ9C091 1923 aaPredicted RBP21.37■■□□□ 1.01
COL20A1-207ENST00000494913 F5H6K3 240 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 HSPD1P10809 573 aaKnown RBP21.37■■□□□ 1.01
COL20A1-207ENST00000494913 XRCC5P13010 732 aaKnown RBP21.37■■□□□ 1.01
COL20A1-207ENST00000494913 PDE4AP27815 886 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 KLRC3Q07444 240 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 FAM83BQ5T0W9 1011 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 MB21D1Q8N884 522 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 NEDD1Q8NHV4 660 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 NKX2-3Q8TAU0 364 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 USP6NLQ92738 828 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 FBXO28Q9NVF7 368 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 PLXNB2O15031 1838 aa21.37■■□□□ 1.01
COL20A1-207ENST00000494913 CCDC171Q6TFL3 1326 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 TTLL1O95922 423 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 RGS2P41220 211 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 GJA8P48165 433 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 PLS1Q14651 629 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 MKL1Q969V6 931 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 NUP88Q99567 741 aaPredicted RBP21.36■■□□□ 1.01
COL20A1-207ENST00000494913 MOV10L1Q9BXT6 1211 aaKnown RBP21.36■■□□□ 1.01
COL20A1-207ENST00000494913 SPATC1LQ9H0A9 340 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 DIAPH3Q9NSV4 1193 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 ANAPC4Q9UJX5 808 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 IVNS1ABPQ9Y6Y0 642 aa21.36■■□□□ 1.01
COL20A1-207ENST00000494913 RLFQ13129 1914 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms