RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 GIPC2Q8TF65 315 aa7.65□□□□□ -1.18
CCDC66-222ENST00000494672 MYLIPQ8WY64 445 aa7.65□□□□□ -1.18
CCDC66-222ENST00000494672 ASPNQ9BXN1 380 aa7.65□□□□□ -1.18
CCDC66-222ENST00000494672 COPRSQ9NQ92 184 aa7.65□□□□□ -1.18
CCDC66-222ENST00000494672 LRRN2O75325 713 aa7.64□□□□□ -1.19
CCDC66-222ENST00000494672 LTKP29376 864 aa7.64□□□□□ -1.19
CCDC66-222ENST00000494672 KIF2CQ99661 725 aa7.64□□□□□ -1.19
CCDC66-222ENST00000494672 KCNQ5Q9NR82 932 aa7.64□□□□□ -1.19
CCDC66-222ENST00000494672 GREM1O60565 184 aa7.63□□□□□ -1.19
CCDC66-222ENST00000494672 HPXP02790 462 aa7.63□□□□□ -1.19
CCDC66-222ENST00000494672 CLEC16AQ2KHT3 1053 aa7.63□□□□□ -1.19
CCDC66-222ENST00000494672 HS2ST1Q7LGA3 356 aa7.63□□□□□ -1.19
CCDC66-222ENST00000494672 DHX38Q92620 1227 aaKnown RBP7.63□□□□□ -1.19
CCDC66-222ENST00000494672 PPP1R16BQ96T49 567 aa7.63□□□□□ -1.19
CCDC66-222ENST00000494672 LRRC3Q9BY71 257 aa7.63□□□□□ -1.19
CCDC66-222ENST00000494672 GGT7Q9UJ14 662 aa7.63□□□□□ -1.19
CCDC66-222ENST00000494672 SLC22A31A6NKX4 558 aa7.62□□□□□ -1.19
CCDC66-222ENST00000494672 RGS13O14921 159 aa7.62□□□□□ -1.19
CCDC66-222ENST00000494672 RAP1GAPP47736 663 aa7.62□□□□□ -1.19
CCDC66-222ENST00000494672 ERVFC1P60507 584 aa7.62□□□□□ -1.19
CCDC66-222ENST00000494672 SYDE1Q6ZW31 735 aaPredicted RBP7.62□□□□□ -1.19
CCDC66-222ENST00000494672 PDZD8Q8NEN9 1154 aa7.62□□□□□ -1.19
CCDC66-222ENST00000494672 ZNF296Q8WUU4 475 aaPredicted RBP7.62□□□□□ -1.19
CCDC66-222ENST00000494672 ASCC2Q9H1I8 757 aaPredicted RBP7.62□□□□□ -1.19
CCDC66-222ENST00000494672 BRMS1Q9HCU9 246 aa7.62□□□□□ -1.19
CCDC66-222ENST00000494672 RBM47A0AV96 593 aaKnown RBP7.61□□□□□ -1.19
CCDC66-222ENST00000494672 DNAJA2O60884 412 aa7.61□□□□□ -1.19
CCDC66-222ENST00000494672 ATE1O95260 518 aa7.61□□□□□ -1.19
CCDC66-222ENST00000494672 RAG1P15918 1043 aa7.61□□□□□ -1.19
CCDC66-222ENST00000494672 MRPL58Q14197 206 aaKnown RBP7.61□□□□□ -1.19
CCDC66-222ENST00000494672 ARSHQ5FYA8 562 aa7.61□□□□□ -1.19
CCDC66-222ENST00000494672 OXR1Q8N573 874 aa7.61□□□□□ -1.19
CCDC66-222ENST00000494672 FBXO15Q8NCQ5 510 aaPredicted RBP7.61□□□□□ -1.19
CCDC66-222ENST00000494672 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC66-222ENST00000494672 NSUN3Q9H649 340 aaKnown RBP7.61□□□□□ -1.19
CCDC66-222ENST00000494672 PCDHB14Q9Y5E9 798 aa7.61□□□□□ -1.19
CCDC66-222ENST00000494672 PCDHA11Q9Y5I1 949 aa7.61□□□□□ -1.19
CCDC66-222ENST00000494672 RNF4P78317 190 aa7.6□□□□□ -1.19
CCDC66-222ENST00000494672 LILRA2Q8N149 483 aa7.6□□□□□ -1.19
CCDC66-222ENST00000494672 ENOX1Q8TC92 643 aaKnown RBP7.6□□□□□ -1.19
CCDC66-222ENST00000494672 DIRC2Q96SL1 478 aa7.6□□□□□ -1.19
CCDC66-222ENST00000494672 GMIPQ9P107 970 aa7.6□□□□□ -1.19
CCDC66-222ENST00000494672 ZGLP1P0C6A0 271 aa7.59□□□□□ -1.19
CCDC66-222ENST00000494672 RAD51AP2Q09MP3 1159 aa7.59□□□□□ -1.19
CCDC66-222ENST00000494672 SPPL2CQ8IUH8 684 aa7.59□□□□□ -1.19
CCDC66-222ENST00000494672 VWCEQ96DN2 955 aa7.59□□□□□ -1.19
CCDC66-222ENST00000494672 EHMT1Q9H9B1 1298 aa7.59□□□□□ -1.19
CCDC66-222ENST00000494672 DCP1AQ9NPI6 582 aaPredicted RBP7.59□□□□□ -1.19
CCDC66-222ENST00000494672 FITM1A5D6W6 292 aa7.58□□□□□ -1.2
CCDC66-222ENST00000494672 TSPAN15O95858 294 aa7.58□□□□□ -1.2
CCDC66-222ENST00000494672 ANKLE2Q86XL3 938 aa7.58□□□□□ -1.2
CCDC66-222ENST00000494672 REXO1Q8N1G1 1221 aaKnown RBP7.58□□□□□ -1.2
CCDC66-222ENST00000494672 EPB41L4BQ9H329 900 aa7.58□□□□□ -1.2
CCDC66-222ENST00000494672 ADAMTS1Q9UHI8 967 aa7.58□□□□□ -1.2
CCDC66-222ENST00000494672 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 SHISA3A0PJX4 238 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 NFIBO00712 420 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 UBOX5O94941 541 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 TMEM253P0C7T8 217 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 CRKP46108 304 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 ZNF165P49910 485 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 CHRNEQ04844 493 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 APOBRQ0VD83 1088 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 DUSP4Q13115 394 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 SEZ6Q53EL9 994 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 CDCP2Q5VXM1 449 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 TMEM87AQ8NBN3 555 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 TOX2Q96NM4 488 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 UBP1Q9NZI7 540 aa7.57□□□□□ -1.2
CCDC66-222ENST00000494672 MCM4P33991 863 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 TRHRP34981 398 aaPredicted RBP7.56□□□□□ -1.2
CCDC66-222ENST00000494672 CCNFP41002 786 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 TEKQ02763 1124 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 NMIQ13287 307 aaPredicted RBP7.56□□□□□ -1.2
CCDC66-222ENST00000494672 NR0B2Q15466 257 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 LRRFIP1Q32MZ4 808 aaKnown RBP7.56□□□□□ -1.2
CCDC66-222ENST00000494672 GK5Q6ZS86 529 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 DAGLBQ8NCG7 672 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 SYTL5Q8TDW5 730 aaPredicted RBP7.56□□□□□ -1.2
CCDC66-222ENST00000494672 NKD1Q969G9 470 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 ATG4CQ96DT6 458 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 C19orf44Q9H6X5 657 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
CCDC66-222ENST00000494672 ZBTB7CA1YPR0 619 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 KRTAP19-4Q3LI73 84 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 NBPF12Q5TAG4 269 aaPredicted RBP7.55□□□□□ -1.2
CCDC66-222ENST00000494672 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 OVOS1Q6IE37 1185 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 RNF111Q6ZNA4 994 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 NT5C1AQ9BXI3 368 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 RNF32Q9H0A6 362 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 SP110Q9HB58 689 aa7.55□□□□□ -1.2
CCDC66-222ENST00000494672 SSU72P8A0A1W2PR75 194 aa7.54□□□□□ -1.2
CCDC66-222ENST00000494672 CLEC3AO75596 197 aa7.54□□□□□ -1.2
CCDC66-222ENST00000494672 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
CCDC66-222ENST00000494672 CLCQ05315 142 aa7.54□□□□□ -1.2
CCDC66-222ENST00000494672 SNX17Q15036 470 aa7.54□□□□□ -1.2
CCDC66-222ENST00000494672 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
CCDC66-222ENST00000494672 NLRC3Q7RTR2 1065 aa7.54□□□□□ -1.2
CCDC66-222ENST00000494672 ANKS4BQ8N8V4 417 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms