RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
SKA1-205ENST00000494518 LHX8Q68G74 356 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 SIRT2Q8IXJ6 389 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
SKA1-205ENST00000494518 CLASRPQ8N2M8 674 aaKnown RBP15.31■□□□□ 0.04
SKA1-205ENST00000494518 DYNLL2Q96FJ2 89 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 GDF15Q99988 308 aa15.31■□□□□ 0.04
SKA1-205ENST00000494518 A0A1W2PPC1 479 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 TCRBV5S4A2TA0A5A2 114 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 PRKAB2O43741 272 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 GLRX3O76003 335 aaKnown RBP15.3■□□□□ 0.04
SKA1-205ENST00000494518 PTPREP23469 700 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 CNGA1P29973 690 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 LRRC26Q2I0M4 334 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 KIAA1755Q5JYT7 1200 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 NPLOC4Q8TAT6 608 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 TANGO6Q9C0B7 1094 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 BOLA2Q9H3K6 86 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 DCP1AQ9NPI6 582 aaPredicted RBP15.3■□□□□ 0.04
SKA1-205ENST00000494518 IVNS1ABPQ9Y6Y0 642 aa15.3■□□□□ 0.04
SKA1-205ENST00000494518 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
SKA1-205ENST00000494518 CYP2D7A0A087X1C5 515 aa15.29■□□□□ 0.04
SKA1-205ENST00000494518 SLC15A5A6NIM6 579 aa15.29■□□□□ 0.04
SKA1-205ENST00000494518 MBD4O95243 580 aa15.29■□□□□ 0.04
SKA1-205ENST00000494518 CYP2C19P33261 490 aa15.29■□□□□ 0.04
SKA1-205ENST00000494518 MFSD14CQ5VZR4 134 aa15.29■□□□□ 0.04
SKA1-205ENST00000494518 HMMRO75330 724 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 COL6A1P12109 1028 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 AKR1B1P15121 316 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 ATP2B2Q01814 1243 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 GRB14Q14449 540 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 SPICE1Q8N0Z3 855 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.28■□□□□ 0.04
SKA1-205ENST00000494518 MOV10L1Q9BXT6 1211 aaKnown RBP15.28■□□□□ 0.04
SKA1-205ENST00000494518 PAG1Q9NWQ8 432 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 PLXNA1Q9UIW2 1896 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 ZNF236Q9UL36 1845 aa15.28■□□□□ 0.04
SKA1-205ENST00000494518 CUL9Q8IWT3 2517 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 LAMA2P24043 3122 aaKnown RBP15.27■□□□□ 0.04
SKA1-205ENST00000494518 BMP8BP34820 402 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 ATN1P54259 1190 aaPredicted RBP15.27■□□□□ 0.04
SKA1-205ENST00000494518 MDM2Q00987 491 aaPredicted RBP15.27■□□□□ 0.04
SKA1-205ENST00000494518 PLS1Q14651 629 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 ANO1Q5XXA6 986 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 TMED8Q6PL24 325 aaPredicted RBP15.27■□□□□ 0.04
SKA1-205ENST00000494518 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 Q7L0L9 218 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 RPAP2Q8IXW5 612 aaPredicted RBP15.27■□□□□ 0.04
SKA1-205ENST00000494518 TRPV1Q8NER1 839 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 UBE2OQ9C0C9 1292 aaKnown RBP15.27■□□□□ 0.04
SKA1-205ENST00000494518 SENP6Q9GZR1 1112 aaPredicted RBP15.27■□□□□ 0.04
SKA1-205ENST00000494518 ZBTB40Q9NUA8 1239 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 DDX19BQ9UMR2 479 aa15.27■□□□□ 0.04
SKA1-205ENST00000494518 MS4A1P11836 297 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 ADORA2AP29274 412 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 ADD2P35612 726 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 ICA1Q05084 483 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 COG2Q14746 738 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 TMEM179Q6ZVK1 233 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 DPP9Q86TI2 863 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 SPATC1LQ9H0A9 340 aa15.26■□□□□ 0.03
SKA1-205ENST00000494518 DDX20Q9UHI6 824 aaKnown RBP15.26■□□□□ 0.03
SKA1-205ENST00000494518 A0A0C4DFX4 3053 aa15.25■□□□□ 0.03
SKA1-205ENST00000494518 SMARCA5O60264 1052 aaPredicted RBP15.25■□□□□ 0.03
SKA1-205ENST00000494518 FLOT1O75955 427 aa15.25■□□□□ 0.03
SKA1-205ENST00000494518 ERCC3P19447 782 aa15.25■□□□□ 0.03
SKA1-205ENST00000494518 TDHQ8IZJ6 230 aa15.25■□□□□ 0.03
SKA1-205ENST00000494518 ATG4CQ96DT6 458 aa15.25■□□□□ 0.03
SKA1-205ENST00000494518 LTBP2Q14767 1821 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 COBLO75128 1261 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 RAB11FIP3O75154 756 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 HOXC6P09630 235 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 ATP5JP18859 108 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 NCAPG2Q86XI2 1143 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 SIAH1Q8IUQ4 282 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 ARHGEF10LQ9HCE6 1279 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 HOXC10Q9NYD6 342 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 SWAP70Q9UH65 585 aa15.24■□□□□ 0.03
SKA1-205ENST00000494518 USP17L12C9JPN9 530 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 USP17L21D6R901 530 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 RAD21O60216 631 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 CYBAP13498 195 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 CDK8P49336 464 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 PRAMEF19Q5SWL8 479 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 GJC2Q5T442 439 aaPredicted RBP15.23■□□□□ 0.03
SKA1-205ENST00000494518 C20orf194Q5TEA3 1177 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 STK11IPQ8N1F8 1099 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 DEFB123Q8N688 67 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 SLC17A8Q8NDX2 589 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 HAUS7Q99871 368 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.23■□□□□ 0.03
SKA1-205ENST00000494518 VCPKMTQ9H867 229 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
SKA1-205ENST00000494518 GREB1LQ9C091 1923 aaPredicted RBP15.22■□□□□ 0.03
SKA1-205ENST00000494518 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
SKA1-205ENST00000494518 LPAR1Q92633 364 aa15.22■□□□□ 0.03
SKA1-205ENST00000494518 ATP8A2Q9NTI2 1148 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms