RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 TMX2Q9Y320 296 aa15.13■□□□□ 0.01
HSPG2-212ENST00000493940 PLXNA1Q9UIW2 1896 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 EEF2P13639 858 aaKnown RBP15.12■□□□□ 0.01
HSPG2-212ENST00000493940 FXR1P51114 621 aaKnown RBP eCLIP15.12■□□□□ 0.01
HSPG2-212ENST00000493940 USP14P54578 494 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 VPS53Q5VIR6 699 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 GIMAP6Q6P9H5 292 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 SPICE1Q8N0Z3 855 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 SLAIN1Q8ND83 568 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 PXYLP1Q8TE99 480 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 COA7Q96BR5 231 aa15.12■□□□□ 0.01
HSPG2-212ENST00000493940 BIN2Q9UBW5 565 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-212ENST00000493940 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 PRDM1O75626 825 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 CYP2B6P20813 491 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 CCL14Q16627 93 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 UBE2Q1Q7Z7E8 422 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 PLEKHM2Q8IWE5 1019 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 TRIB2Q92519 343 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 CCDC17Q96LX7 622 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 RNF208Q9H0X6 261 aa15.11■□□□□ 0.01
HSPG2-212ENST00000493940 ARPP21Q9UBL0 812 aaPredicted RBP15.11■□□□□ 0.01
HSPG2-212ENST00000493940 GJB1P08034 283 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 GJA8P48165 433 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 ICA1Q05084 483 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 MORN1Q5T089 497 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 LBX2Q6XYB7 198 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 GPR142Q7Z601 462 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 NKX2-3Q8TAU0 364 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 VCPKMTQ9H867 229 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 FBXO28Q9NVF7 368 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 RABGAP1Q9Y3P9 1069 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 DNAH12Q6ZR08 3092 aa15.1■□□□□ 0.01
HSPG2-212ENST00000493940 IGKV6D-41A0A0C4DH26 115 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 APPP05067 770 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 TDO2P48775 406 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 NUCB1Q02818 461 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 CHD1LQ86WJ1 897 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 RWDD1Q9H446 243 aaPredicted RBP15.09■□□□□ 0.01
HSPG2-212ENST00000493940 FLRT1Q9NZU1 646 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 COLQQ9Y215 455 aaPredicted RBP15.09■□□□□ 0.01
HSPG2-212ENST00000493940 MCM3APO60318 1980 aa15.09■□□□□ 0.01
HSPG2-212ENST00000493940 SGPL1O95470 568 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 DSG3P32926 999 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 ATP2B2Q01814 1243 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 CTDSPL2Q05D32 466 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 AAMPQ13685 434 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 COG2Q14746 738 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 PLEKHH3Q7Z736 793 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 ZNF589Q86UQ0 364 aaPredicted RBP15.08■□□□□ 0
HSPG2-212ENST00000493940 U2AF1L4Q8WU68 220 aaKnown RBP15.08■□□□□ 0
HSPG2-212ENST00000493940 EVI5LQ96CN4 794 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 ATG4CQ96DT6 458 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 DDRGK1Q96HY6 314 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 NUP88Q99567 741 aaPredicted RBP15.08■□□□□ 0
HSPG2-212ENST00000493940 TANGO6Q9C0B7 1094 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 KANSL2Q9H9L4 492 aa15.08■□□□□ 0
HSPG2-212ENST00000493940 PAK6Q9NQU5 681 aaPredicted RBP15.08■□□□□ 0
HSPG2-212ENST00000493940 GNAT2P19087 354 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 PDE4AP27815 886 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 MAPK4P31152 587 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 UBXN2AP68543 259 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 FAM47AQ5JRC9 791 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 AMOTL1Q8IY63 956 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 NPLOC4Q8TAT6 608 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 DEFB118Q96PH6 123 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 NUDT12Q9BQG2 462 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 MOV10L1Q9BXT6 1211 aaKnown RBP15.07■□□□□ 0
HSPG2-212ENST00000493940 MKNK2Q9HBH9 465 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 ARHGEF10LQ9HCE6 1279 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 ADAMTS5Q9UNA0 930 aa15.07■□□□□ 0
HSPG2-212ENST00000493940 ZNF236Q9UL36 1845 aa15.06■□□□□ 0
HSPG2-212ENST00000493940 PTPREP23469 700 aa15.06■□□□□ 0
HSPG2-212ENST00000493940 MNX1P50219 401 aaPredicted RBP15.06■□□□□ 0
HSPG2-212ENST00000493940 PPARAQ07869 468 aa15.06■□□□□ 0
HSPG2-212ENST00000493940 NMIQ13287 307 aaPredicted RBP15.06■□□□□ 0
HSPG2-212ENST00000493940 FAM83BQ5T0W9 1011 aa15.06■□□□□ 0
HSPG2-212ENST00000493940 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
HSPG2-212ENST00000493940 OSBPL3Q9H4L5 887 aa15.06■□□□□ 0
HSPG2-212ENST00000493940 HOXC10Q9NYD6 342 aa15.06■□□□□ 0
HSPG2-212ENST00000493940 CLIP2Q9UDT6 1046 aa15.06■□□□□ 0
HSPG2-212ENST00000493940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.06■□□□□ 0
HSPG2-212ENST00000493940 RANBP2P49792 3224 aaKnown RBP15.05■□□□□ -0
HSPG2-212ENST00000493940 H0YGN5 161 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 FLOT1O75955 427 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 IGHA2P01877 340 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 HMGCRP04035 888 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 XRCC5P13010 732 aaKnown RBP15.05■□□□□ -0
HSPG2-212ENST00000493940 CACNB2Q08289 660 aaPredicted RBP15.05■□□□□ -0
HSPG2-212ENST00000493940 MAP2K5Q13163 448 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 TMEM132BQ14DG7 1078 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 MAP3K21Q5TCX8 1036 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 DIS3LQ8TF46 1054 aaKnown RBP15.05■□□□□ -0
HSPG2-212ENST00000493940 GTF3C2Q8WUA4 911 aaPredicted RBP15.05■□□□□ -0
HSPG2-212ENST00000493940 LPAR1Q92633 364 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 CEP95Q96GE4 821 aa15.05■□□□□ -0
HSPG2-212ENST00000493940 SPATC1LQ9H0A9 340 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms