RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RBBP6Q7Z6E9 1792 aaKnown RBP26.94■■□□□ 1.9
SNIP1-203ENST00000493916 ZMYM6O95789 1325 aa26.94■■□□□ 1.9
SNIP1-203ENST00000493916 CCDC171Q6TFL3 1326 aa26.94■■□□□ 1.9
SNIP1-203ENST00000493916 IGKV6D-41A0A0C4DH26 115 aa26.94■■□□□ 1.9
SNIP1-203ENST00000493916 ERVK-9P63128 1117 aa26.94■■□□□ 1.9
SNIP1-203ENST00000493916 ERVK-24P63145 666 aa26.94■■□□□ 1.9
SNIP1-203ENST00000493916 ZNF444Q8N0Y2 327 aaPredicted RBP26.94■■□□□ 1.9
SNIP1-203ENST00000493916 ANAPC4Q9UJX5 808 aa26.94■■□□□ 1.9
SNIP1-203ENST00000493916 RABGAP1Q9Y3P9 1069 aa26.94■■□□□ 1.9
SNIP1-203ENST00000493916 HIP1O00291 1037 aa26.93■■□□□ 1.9
SNIP1-203ENST00000493916 PRDM1O75626 825 aa26.93■■□□□ 1.9
SNIP1-203ENST00000493916 MFAP1P55081 439 aaKnown RBP26.93■■□□□ 1.9
SNIP1-203ENST00000493916 IRF5Q13568 498 aa26.93■■□□□ 1.9
SNIP1-203ENST00000493916 SH3TC2Q8TF17 1288 aa26.93■■□□□ 1.9
SNIP1-203ENST00000493916 NYAP2Q9P242 653 aa26.93■■□□□ 1.9
SNIP1-203ENST00000493916 SPDYE16A6NNV3 312 aaPredicted RBP26.92■■□□□ 1.9
SNIP1-203ENST00000493916 WDR46O15213 610 aaKnown RBP26.92■■□□□ 1.9
SNIP1-203ENST00000493916 HSPD1P10809 573 aaKnown RBP26.92■■□□□ 1.9
SNIP1-203ENST00000493916 GRK4P32298 578 aa26.92■■□□□ 1.9
SNIP1-203ENST00000493916 FLT3LGP49771 235 aa26.92■■□□□ 1.9
SNIP1-203ENST00000493916 TTC22Q5TAA0 569 aa26.92■■□□□ 1.9
SNIP1-203ENST00000493916 SLAIN1Q8ND83 568 aa26.92■■□□□ 1.9
SNIP1-203ENST00000493916 PAGR1Q9BTK6 254 aa26.92■■□□□ 1.9
SNIP1-203ENST00000493916 TANGO6Q9C0B7 1094 aa26.92■■□□□ 1.9
SNIP1-203ENST00000493916 DIAPH3Q9NSV4 1193 aa26.92■■□□□ 1.9
SNIP1-203ENST00000493916 A0A0G2JMZ2 1700 aa26.91■■□□□ 1.9
SNIP1-203ENST00000493916 PEX10O60683 326 aa26.91■■□□□ 1.9
SNIP1-203ENST00000493916 CNMDO75829 334 aa26.91■■□□□ 1.9
SNIP1-203ENST00000493916 ATP2B2Q01814 1243 aa26.91■■□□□ 1.9
SNIP1-203ENST00000493916 GOPCQ9HD26 462 aa26.91■■□□□ 1.9
SNIP1-203ENST00000493916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.91■■□□□ 1.9
SNIP1-203ENST00000493916 GSPT1P15170 499 aaKnown RBP26.9■■□□□ 1.9
SNIP1-203ENST00000493916 MAPK4P31152 587 aa26.9■■□□□ 1.9
SNIP1-203ENST00000493916 COG2Q14746 738 aa26.9■■□□□ 1.9
SNIP1-203ENST00000493916 Q3C1V9 767 aa26.9■■□□□ 1.9
SNIP1-203ENST00000493916 SPICE1Q8N0Z3 855 aa26.9■■□□□ 1.9
SNIP1-203ENST00000493916 HOXC10Q9NYD6 342 aa26.9■■□□□ 1.9
SNIP1-203ENST00000493916 RLFQ13129 1914 aa26.89■■□□□ 1.9
SNIP1-203ENST00000493916 FGAP02671 866 aa26.89■■□□□ 1.9
SNIP1-203ENST00000493916 MLLT1Q03111 559 aaPredicted RBP26.89■■□□□ 1.9
SNIP1-203ENST00000493916 NEDD1Q8NHV4 660 aa26.89■■□□□ 1.9
SNIP1-203ENST00000493916 PXYLP1Q8TE99 480 aa26.89■■□□□ 1.9
SNIP1-203ENST00000493916 SYNPO2Q9UMS6 1093 aa26.89■■□□□ 1.9
SNIP1-203ENST00000493916 TSPY3P0CV98 308 aa26.88■■□□□ 1.89
SNIP1-203ENST00000493916 TSPY8P0CW00 308 aa26.88■■□□□ 1.89
SNIP1-203ENST00000493916 CCNA1P78396 465 aa26.88■■□□□ 1.89
SNIP1-203ENST00000493916 CTDSPL2Q05D32 466 aa26.88■■□□□ 1.89
SNIP1-203ENST00000493916 CWC27Q6UX04 472 aaKnown RBP26.88■■□□□ 1.89
SNIP1-203ENST00000493916 CEP95Q96GE4 821 aa26.88■■□□□ 1.89
SNIP1-203ENST00000493916 MTMR4Q9NYA4 1195 aa26.88■■□□□ 1.89
SNIP1-203ENST00000493916 GJD2Q9UKL4 321 aa26.88■■□□□ 1.89
SNIP1-203ENST00000493916 BRCA2P51587 3418 aa26.87■■□□□ 1.89
SNIP1-203ENST00000493916 ADCY3O60266 1144 aa26.87■■□□□ 1.89
SNIP1-203ENST00000493916 FGRP09769 529 aa26.87■■□□□ 1.89
SNIP1-203ENST00000493916 MKL1Q969V6 931 aa26.87■■□□□ 1.89
SNIP1-203ENST00000493916 PORCNQ9H237 461 aa26.87■■□□□ 1.89
SNIP1-203ENST00000493916 BTBD7Q9P203 1132 aa26.87■■□□□ 1.89
SNIP1-203ENST00000493916 PLXNB2O15031 1838 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 PARP14Q460N5 1801 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 POTEFA5A3E0 1075 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 FLOT1O75955 427 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 DSG3P32926 999 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 TFAP4Q01664 338 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 FAM47AQ5JRC9 791 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 MB21D1Q8N884 522 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 SOCS4Q8WXH5 440 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 TMEM106CQ9BVX2 250 aa26.86■■□□□ 1.89
SNIP1-203ENST00000493916 TNRC18O15417 2968 aaPredicted RBP26.86■■□□□ 1.89
SNIP1-203ENST00000493916 ORC4O43929 436 aa26.85■■□□□ 1.89
SNIP1-203ENST00000493916 TTLL1O95922 423 aa26.85■■□□□ 1.89
SNIP1-203ENST00000493916 CCAR1Q8IX12 1150 aaKnown RBP26.85■■□□□ 1.89
SNIP1-203ENST00000493916 CLIP2Q9UDT6 1046 aa26.85■■□□□ 1.89
SNIP1-203ENST00000493916 TACC3Q9Y6A5 838 aa26.85■■□□□ 1.89
SNIP1-203ENST00000493916 UBXN2AP68543 259 aa26.84■■□□□ 1.89
SNIP1-203ENST00000493916 PPP4R3BQ5MIZ7 849 aa26.84■■□□□ 1.89
SNIP1-203ENST00000493916 GPR142Q7Z601 462 aa26.84■■□□□ 1.89
SNIP1-203ENST00000493916 MYH4Q9Y623 1939 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 F5H6K3 240 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 NDUFB10O96000 172 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 ELNP15502 786 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 KLRC3Q07444 240 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 PLEKHH3Q7Z736 793 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 GMCL1P1Q8NEA9 526 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 NUDT12Q9BQG2 462 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 INCENPQ9NQS7 918 aa26.83■■□□□ 1.89
SNIP1-203ENST00000493916 DOCK3Q8IZD9 2030 aa26.82■■□□□ 1.88
SNIP1-203ENST00000493916 TSPY2A6NKD2 308 aa26.82■■□□□ 1.88
SNIP1-203ENST00000493916 RAD21O60216 631 aa26.82■■□□□ 1.88
SNIP1-203ENST00000493916 MORN1Q5T089 497 aa26.82■■□□□ 1.88
SNIP1-203ENST00000493916 FAM83BQ5T0W9 1011 aa26.82■■□□□ 1.88
SNIP1-203ENST00000493916 ATG4CQ96DT6 458 aa26.82■■□□□ 1.88
SNIP1-203ENST00000493916 BIN2Q9UBW5 565 aaPredicted RBP26.82■■□□□ 1.88
SNIP1-203ENST00000493916 ADAMTS5Q9UNA0 930 aa26.82■■□□□ 1.88
SNIP1-203ENST00000493916 LAMA4Q16363 1823 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 MYCP01106 439 aaPredicted RBP26.81■■□□□ 1.88
SNIP1-203ENST00000493916 INHAP05111 366 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 PCP11498 1178 aaKnown RBP26.81■■□□□ 1.88
SNIP1-203ENST00000493916 XRCC5P13010 732 aaKnown RBP26.81■■□□□ 1.88
SNIP1-203ENST00000493916 MTFR1Q15390 333 aa26.81■■□□□ 1.88
SNIP1-203ENST00000493916 CENPQQ7L2Z9 268 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms