RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.27□□□□□ -1.41
CD46-217ENST00000493796 TRIT1Q9H3H1 467 aaKnown RBP6.27□□□□□ -1.41
CD46-217ENST00000493796 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.41
CD46-217ENST00000493796 RC3H2Q9HBD1 1191 aaKnown RBP6.27□□□□□ -1.41
CD46-217ENST00000493796 TNFRSF10CO14798 259 aa6.26□□□□□ -1.41
CD46-217ENST00000493796 CCNFP41002 786 aa6.26□□□□□ -1.41
CD46-217ENST00000493796 CHMP4BP1P59074 171 aa6.26□□□□□ -1.41
CD46-217ENST00000493796 TMPRSS7Q7RTY8 843 aa6.26□□□□□ -1.41
CD46-217ENST00000493796 ZNF428Q96B54 188 aa6.26□□□□□ -1.41
CD46-217ENST00000493796 FERD3LQ96RJ6 166 aa6.26□□□□□ -1.41
CD46-217ENST00000493796 GPATCH2Q9NW75 528 aa6.26□□□□□ -1.41
CD46-217ENST00000493796 WASH4PA8MWX3 477 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 TPP2P29144 1249 aaPredicted RBP6.25□□□□□ -1.41
CD46-217ENST00000493796 RNF4P78317 190 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 RAD51AP2Q09MP3 1159 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 COL9A2Q14055 689 aaPredicted RBP6.25□□□□□ -1.41
CD46-217ENST00000493796 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 RASGRP4Q8TDF6 673 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 GPRASP2Q96D09 838 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 SPATA32Q96LK8 384 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 TGIF2Q9GZN2 237 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 GINM1Q9NU53 330 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 PODXL2Q9NZ53 605 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 PPT2Q9UMR5 302 aa6.25□□□□□ -1.41
CD46-217ENST00000493796 ESR1P03372 595 aa6.24□□□□□ -1.41
CD46-217ENST00000493796 JUNBP17275 347 aaPredicted RBP6.24□□□□□ -1.41
CD46-217ENST00000493796 GJA8P48165 433 aa6.24□□□□□ -1.41
CD46-217ENST00000493796 NBPF12Q5TAG4 269 aaPredicted RBP6.24□□□□□ -1.41
CD46-217ENST00000493796 INTS3Q68E01 1043 aaKnown RBP6.24□□□□□ -1.41
CD46-217ENST00000493796 ATG4DQ86TL0 474 aaPredicted RBP6.24□□□□□ -1.41
CD46-217ENST00000493796 TSPYL5Q86VY4 417 aaPredicted RBP6.24□□□□□ -1.41
CD46-217ENST00000493796 SLC9A7Q96T83 725 aa6.24□□□□□ -1.41
CD46-217ENST00000493796 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 BIN1O00499 593 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 CLEC3AO75596 197 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 PAPLNO95428 1278 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 ACRP10323 421 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 SOX9P48436 509 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 FBXW10Q5XX13 1052 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 CREG2Q8IUH2 290 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 TMEM192Q8IY95 271 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 TAB3Q8N5C8 712 aaPredicted RBP6.23□□□□□ -1.41
CD46-217ENST00000493796 RBBP8NLQ8NC74 664 aaPredicted RBP6.23□□□□□ -1.41
CD46-217ENST00000493796 SLC6A18Q96N87 628 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 DUSP13Q9UII6 198 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 EFR3BQ9Y2G0 817 aa6.23□□□□□ -1.41
CD46-217ENST00000493796 PAX4O43316 350 aa6.22□□□□□ -1.41
CD46-217ENST00000493796 NBPF9Q3BBW0 867 aa6.22□□□□□ -1.41
CD46-217ENST00000493796 FLAD1Q8NFF5 587 aa6.22□□□□□ -1.41
CD46-217ENST00000493796 ALPK1Q96QP1 1244 aa6.22□□□□□ -1.41
CD46-217ENST00000493796 TM9SF2Q99805 663 aa6.22□□□□□ -1.41
CD46-217ENST00000493796 ACBD3Q9H3P7 528 aa6.22□□□□□ -1.41
CD46-217ENST00000493796 CTNND2Q9UQB3 1225 aa6.22□□□□□ -1.41
CD46-217ENST00000493796 TCF3P15923 654 aa6.21□□□□□ -1.42
CD46-217ENST00000493796 RBM25P49756 843 aaKnown RBP6.21□□□□□ -1.42
CD46-217ENST00000493796 NMIQ13287 307 aaPredicted RBP6.21□□□□□ -1.42
CD46-217ENST00000493796 CCDC81Q6ZN84 652 aa6.21□□□□□ -1.42
CD46-217ENST00000493796 LSRQ86X29 649 aaPredicted RBP6.21□□□□□ -1.42
CD46-217ENST00000493796 ENOX1Q8TC92 643 aaKnown RBP6.21□□□□□ -1.42
CD46-217ENST00000493796 ASIC4Q96FT7 647 aa6.21□□□□□ -1.42
CD46-217ENST00000493796 ZNF512BQ96KM6 892 aaPredicted RBP6.21□□□□□ -1.42
CD46-217ENST00000493796 ASCC2Q9H1I8 757 aaPredicted RBP6.21□□□□□ -1.42
CD46-217ENST00000493796 CCSER2Q9H7U1 834 aa6.21□□□□□ -1.42
CD46-217ENST00000493796 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
CD46-217ENST00000493796 SLAMF8Q9P0V8 285 aa6.21□□□□□ -1.42
CD46-217ENST00000493796 GUCY2CP25092 1073 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 GDNFP39905 211 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 EGR3Q06889 387 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 SNW1Q13573 536 aaKnown RBP6.2□□□□□ -1.42
CD46-217ENST00000493796 CLEC16AQ2KHT3 1053 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 RUFY4Q6ZNE9 571 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 SYTL5Q8TDW5 730 aaPredicted RBP6.2□□□□□ -1.42
CD46-217ENST00000493796 CCDC120Q96HB5 630 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 HDAC8Q9BY41 377 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 SUCOQ9UBS9 1254 aaKnown RBP6.2□□□□□ -1.42
CD46-217ENST00000493796 INPP5FQ9Y2H2 1132 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
CD46-217ENST00000493796 DNAJC25-GNG10A0A024R161 153 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 FAM86C2PA6NEL3 165 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 ERCC5P28715 1186 aaPredicted RBP6.19□□□□□ -1.42
CD46-217ENST00000493796 LTKP29376 864 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 NASPP49321 788 aaPredicted RBP6.19□□□□□ -1.42
CD46-217ENST00000493796 RALGPS1Q5JS13 557 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 TMC3Q7Z5M5 1100 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 DAGLBQ8NCG7 672 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 SEC16BQ96JE7 1060 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 DHRS1Q96LJ7 313 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 FMNL2Q96PY5 1086 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 CRBNQ96SW2 442 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 SRRTQ9BXP5 876 aaKnown RBP6.19□□□□□ -1.42
CD46-217ENST00000493796 MKRN2Q9H000 416 aaKnown RBP6.19□□□□□ -1.42
CD46-217ENST00000493796 RNF114Q9Y508 228 aa6.19□□□□□ -1.42
CD46-217ENST00000493796 CARMIL2Q6F5E8 1435 aa6.18□□□□□ -1.42
CD46-217ENST00000493796 AFMP43652 599 aa6.18□□□□□ -1.42
CD46-217ENST00000493796 GIPRP48546 466 aa6.18□□□□□ -1.42
CD46-217ENST00000493796 PMS1P54277 932 aaKnown RBP6.18□□□□□ -1.42
CD46-217ENST00000493796 EIF6P56537 245 aaKnown RBP6.18□□□□□ -1.42
CD46-217ENST00000493796 ZYXQ15942 572 aaKnown RBP6.18□□□□□ -1.42
CD46-217ENST00000493796 UNC5AQ6ZN44 842 aa6.18□□□□□ -1.42
CD46-217ENST00000493796 TTC6Q86TZ1 520 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms